Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sdf4Q61112 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sdf4Q61112 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.73■■□□□ 1.71
Sdf4Q61112 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sdf4Q61112 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sdf4Q61112 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Sdf4Q61112 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Sdf4Q61112 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Sdf4Q61112 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sdf4Q61112 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Sdf4Q61112 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sdf4Q61112 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sdf4Q61112 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Sdf4Q61112 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sdf4Q61112 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.61■■□□□ 1.69
Sdf4Q61112 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sdf4Q61112 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Sdf4Q61112 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sdf4Q61112 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sdf4Q61112 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sdf4Q61112 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Sdf4Q61112 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Sdf4Q61112 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.55■■□□□ 1.68
Sdf4Q61112 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Sdf4Q61112 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Sdf4Q61112 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Sdf4Q61112 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Sdf4Q61112 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
Sdf4Q61112 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Sdf4Q61112 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sdf4Q61112 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.52■■□□□ 1.68
Sdf4Q61112 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Sdf4Q61112 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sdf4Q61112 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.48■■□□□ 1.67
Sdf4Q61112 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Sdf4Q61112 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.48■■□□□ 1.67
Sdf4Q61112 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Sdf4Q61112 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Sdf4Q61112 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Sdf4Q61112 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sdf4Q61112 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.44■■□□□ 1.66
Sdf4Q61112 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.44■■□□□ 1.66
Sdf4Q61112 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Sdf4Q61112 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Sdf4Q61112 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Sdf4Q61112 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sdf4Q61112 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sdf4Q61112 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sdf4Q61112 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sdf4Q61112 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Sdf4Q61112 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sdf4Q61112 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Sdf4Q61112 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Sdf4Q61112 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sdf4Q61112 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Sdf4Q61112 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sdf4Q61112 Zfp131-205ENSMUST00000223812 663 ntBASIC25.36■■□□□ 1.65
Sdf4Q61112 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Sdf4Q61112 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sdf4Q61112 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sdf4Q61112 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Sdf4Q61112 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
Sdf4Q61112 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Sdf4Q61112 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sdf4Q61112 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sdf4Q61112 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sdf4Q61112 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sdf4Q61112 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sdf4Q61112 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sdf4Q61112 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sdf4Q61112 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
Sdf4Q61112 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Sdf4Q61112 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sdf4Q61112 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Sdf4Q61112 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Sdf4Q61112 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Sdf4Q61112 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Sdf4Q61112 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Sdf4Q61112 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.24■■□□□ 1.63
Sdf4Q61112 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Sdf4Q61112 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.23■■□□□ 1.63
Sdf4Q61112 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.23■■□□□ 1.63
Sdf4Q61112 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Sdf4Q61112 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sdf4Q61112 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sdf4Q61112 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.21■■□□□ 1.63
Sdf4Q61112 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Sdf4Q61112 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
Sdf4Q61112 Zxda-201ENSMUST00000117281 2621 ntBASIC25.2■■□□□ 1.62
Sdf4Q61112 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Sdf4Q61112 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Sdf4Q61112 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Sdf4Q61112 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Sdf4Q61112 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Sdf4Q61112 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sdf4Q61112 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Sdf4Q61112 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.17■■□□□ 1.62
Sdf4Q61112 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sdf4Q61112 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Sdf4Q61112 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms