Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.37■□□□□ 0.85
Trav6-3Q5R1E6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-3Q5R1E6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.36■□□□□ 0.85
Trav6-3Q5R1E6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6-3Q5R1E6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6-3Q5R1E6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav6-3Q5R1E6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trav6-3Q5R1E6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6-3Q5R1E6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6-3Q5R1E6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6-3Q5R1E6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav6-3Q5R1E6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trav6-3Q5R1E6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav6-3Q5R1E6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav6-3Q5R1E6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Trav6-3Q5R1E6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav6-3Q5R1E6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6-3Q5R1E6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6-3Q5R1E6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6-3Q5R1E6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6-3Q5R1E6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trav6-3Q5R1E6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6-3Q5R1E6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6-3Q5R1E6 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.25■□□□□ 0.83
Trav6-3Q5R1E6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6-3Q5R1E6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6-3Q5R1E6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6-3Q5R1E6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav6-3Q5R1E6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6-3Q5R1E6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.23■□□□□ 0.83
Trav6-3Q5R1E6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6-3Q5R1E6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6-3Q5R1E6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
Trav6-3Q5R1E6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav6-3Q5R1E6 Gm26115-201ENSMUST00000175605 87 ntBASIC20.21■□□□□ 0.83
Trav6-3Q5R1E6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav6-3Q5R1E6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav6-3Q5R1E6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trav6-3Q5R1E6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav6-3Q5R1E6 Peli2-204ENSMUST00000226513 1320 ntBASIC20.19■□□□□ 0.82
Trav6-3Q5R1E6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Trav6-3Q5R1E6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trav6-3Q5R1E6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6-3Q5R1E6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6-3Q5R1E6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav6-3Q5R1E6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6-3Q5R1E6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.16■□□□□ 0.82
Trav6-3Q5R1E6 Gm8109-201ENSMUST00000194076 746 ntBASIC20.16■□□□□ 0.82
Trav6-3Q5R1E6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6-3Q5R1E6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav6-3Q5R1E6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav6-3Q5R1E6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav6-3Q5R1E6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav6-3Q5R1E6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trav6-3Q5R1E6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trav6-3Q5R1E6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trav6-3Q5R1E6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav6-3Q5R1E6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav6-3Q5R1E6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6-3Q5R1E6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6-3Q5R1E6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6-3Q5R1E6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.09■□□□□ 0.81
Trav6-3Q5R1E6 Amer2-203ENSMUST00000225247 2662 ntBASIC20.09■□□□□ 0.81
Trav6-3Q5R1E6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.08■□□□□ 0.81
Trav6-3Q5R1E6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav6-3Q5R1E6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.07■□□□□ 0.8
Trav6-3Q5R1E6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trav6-3Q5R1E6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trav6-3Q5R1E6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.07■□□□□ 0.8
Trav6-3Q5R1E6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trav6-3Q5R1E6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trav6-3Q5R1E6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav6-3Q5R1E6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav6-3Q5R1E6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6-3Q5R1E6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6-3Q5R1E6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Trav6-3Q5R1E6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6-3Q5R1E6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav6-3Q5R1E6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav6-3Q5R1E6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav6-3Q5R1E6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav6-3Q5R1E6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav6-3Q5R1E6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav6-3Q5R1E6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav6-3Q5R1E6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trav6-3Q5R1E6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav6-3Q5R1E6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6-3Q5R1E6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6-3Q5R1E6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6-3Q5R1E6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav6-3Q5R1E6 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.97■□□□□ 0.79
Trav6-3Q5R1E6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav6-3Q5R1E6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Trav6-3Q5R1E6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav6-3Q5R1E6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.95■□□□□ 0.78
Trav6-3Q5R1E6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav6-3Q5R1E6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav6-3Q5R1E6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav6-3Q5R1E6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6-3Q5R1E6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms