Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.71■■□□□ 1.07
Tmem40Q4FJU9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tmem40Q4FJU9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Tmem40Q4FJU9 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.69■■□□□ 1.06
Tmem40Q4FJU9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmem40Q4FJU9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmem40Q4FJU9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.65■■□□□ 1.06
Tmem40Q4FJU9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tmem40Q4FJU9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tmem40Q4FJU9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tmem40Q4FJU9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.63■■□□□ 1.05
Tmem40Q4FJU9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tmem40Q4FJU9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tmem40Q4FJU9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.59■■□□□ 1.05
Tmem40Q4FJU9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tmem40Q4FJU9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Tmem40Q4FJU9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.57■■□□□ 1.04
Tmem40Q4FJU9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem40Q4FJU9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tmem40Q4FJU9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.55■■□□□ 1.04
Tmem40Q4FJU9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Tmem40Q4FJU9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tmem40Q4FJU9 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.54■■□□□ 1.04
Tmem40Q4FJU9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.54■■□□□ 1.04
Tmem40Q4FJU9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tmem40Q4FJU9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tmem40Q4FJU9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tmem40Q4FJU9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tmem40Q4FJU9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tmem40Q4FJU9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tmem40Q4FJU9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.49■■□□□ 1.03
Tmem40Q4FJU9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Tmem40Q4FJU9 Gm24970-201ENSMUST00000175582 82 ntBASIC21.49■■□□□ 1.03
Tmem40Q4FJU9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.49■■□□□ 1.03
Tmem40Q4FJU9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.47■■□□□ 1.03
Tmem40Q4FJU9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tmem40Q4FJU9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tmem40Q4FJU9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tmem40Q4FJU9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tmem40Q4FJU9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tmem40Q4FJU9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tmem40Q4FJU9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tmem40Q4FJU9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tmem40Q4FJU9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.42■■□□□ 1.02
Tmem40Q4FJU9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Tmem40Q4FJU9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.4■■□□□ 1.02
Tmem40Q4FJU9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tmem40Q4FJU9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tmem40Q4FJU9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Tmem40Q4FJU9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Tmem40Q4FJU9 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.36■■□□□ 1.01
Tmem40Q4FJU9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tmem40Q4FJU9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tmem40Q4FJU9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tmem40Q4FJU9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.34■■□□□ 1.01
Tmem40Q4FJU9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Tmem40Q4FJU9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tmem40Q4FJU9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tmem40Q4FJU9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Tmem40Q4FJU9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Tmem40Q4FJU9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.33■■□□□ 1
Tmem40Q4FJU9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tmem40Q4FJU9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.31■■□□□ 1
Tmem40Q4FJU9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmem40Q4FJU9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmem40Q4FJU9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Tmem40Q4FJU9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tmem40Q4FJU9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Tmem40Q4FJU9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.28■■□□□ 1
Tmem40Q4FJU9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.28■■□□□ 1
Tmem40Q4FJU9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tmem40Q4FJU9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tmem40Q4FJU9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.25■□□□□ 0.99
Tmem40Q4FJU9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tmem40Q4FJU9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tmem40Q4FJU9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmem40Q4FJU9 Gm8503-201ENSMUST00000118131 455 ntBASIC21.24■□□□□ 0.99
Tmem40Q4FJU9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmem40Q4FJU9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmem40Q4FJU9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.24■□□□□ 0.99
Tmem40Q4FJU9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmem40Q4FJU9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmem40Q4FJU9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tmem40Q4FJU9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmem40Q4FJU9 Gm6821-201ENSMUST00000107540 542 ntBASIC21.22■□□□□ 0.99
Tmem40Q4FJU9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tmem40Q4FJU9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Tmem40Q4FJU9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tmem40Q4FJU9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.2■□□□□ 0.98
Tmem40Q4FJU9 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.2■□□□□ 0.98
Tmem40Q4FJU9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmem40Q4FJU9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmem40Q4FJU9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmem40Q4FJU9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tmem40Q4FJU9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tmem40Q4FJU9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Tmem40Q4FJU9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.16■□□□□ 0.98
Tmem40Q4FJU9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.13■□□□□ 0.97
Tmem40Q4FJU9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.13■□□□□ 0.97
Tmem40Q4FJU9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms