Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim63Q38HM4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim63Q38HM4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim63Q38HM4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim63Q38HM4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim63Q38HM4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim63Q38HM4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim63Q38HM4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim63Q38HM4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim63Q38HM4 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.93■□□□□ 0.94
Trim63Q38HM4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim63Q38HM4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim63Q38HM4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim63Q38HM4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim63Q38HM4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trim63Q38HM4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim63Q38HM4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim63Q38HM4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim63Q38HM4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Trim63Q38HM4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trim63Q38HM4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim63Q38HM4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim63Q38HM4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trim63Q38HM4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim63Q38HM4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim63Q38HM4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim63Q38HM4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim63Q38HM4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Trim63Q38HM4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim63Q38HM4 Amer2-203ENSMUST00000225247 2662 ntBASIC20.84■□□□□ 0.93
Trim63Q38HM4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim63Q38HM4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Trim63Q38HM4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim63Q38HM4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim63Q38HM4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim63Q38HM4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim63Q38HM4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim63Q38HM4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim63Q38HM4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim63Q38HM4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim63Q38HM4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim63Q38HM4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim63Q38HM4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim63Q38HM4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim63Q38HM4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim63Q38HM4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim63Q38HM4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.77■□□□□ 0.92
Trim63Q38HM4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim63Q38HM4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.75■□□□□ 0.91
Trim63Q38HM4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim63Q38HM4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim63Q38HM4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim63Q38HM4 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.74■□□□□ 0.91
Trim63Q38HM4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim63Q38HM4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Trim63Q38HM4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim63Q38HM4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim63Q38HM4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim63Q38HM4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim63Q38HM4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trim63Q38HM4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim63Q38HM4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Trim63Q38HM4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim63Q38HM4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim63Q38HM4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim63Q38HM4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim63Q38HM4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim63Q38HM4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim63Q38HM4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim63Q38HM4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim63Q38HM4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
Trim63Q38HM4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim63Q38HM4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim63Q38HM4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim63Q38HM4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim63Q38HM4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim63Q38HM4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim63Q38HM4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim63Q38HM4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.64■□□□□ 0.89
Trim63Q38HM4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim63Q38HM4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim63Q38HM4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim63Q38HM4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim63Q38HM4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim63Q38HM4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim63Q38HM4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Trim63Q38HM4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim63Q38HM4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim63Q38HM4 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.59■□□□□ 0.89
Trim63Q38HM4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Trim63Q38HM4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Trim63Q38HM4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim63Q38HM4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim63Q38HM4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Trim63Q38HM4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim63Q38HM4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim63Q38HM4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim63Q38HM4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim63Q38HM4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trim63Q38HM4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms