Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.71■■■■□ 3.31
KCNQ4P56696 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC35.7■■■■□ 3.31
KCNQ4P56696 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC35.69■■■■□ 3.3
KCNQ4P56696 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC35.68■■■■□ 3.3
KCNQ4P56696 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC35.68■■■■□ 3.3
KCNQ4P56696 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.68■■■■□ 3.3
KCNQ4P56696 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC35.68■■■■□ 3.3
KCNQ4P56696 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
KCNQ4P56696 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
KCNQ4P56696 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
KCNQ4P56696 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
KCNQ4P56696 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
KCNQ4P56696 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC35.65■■■■□ 3.3
KCNQ4P56696 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC35.63■■■■□ 3.29
KCNQ4P56696 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC35.63■■■■□ 3.29
KCNQ4P56696 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC35.62■■■■□ 3.29
KCNQ4P56696 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC35.61■■■■□ 3.29
KCNQ4P56696 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC35.61■■■■□ 3.29
KCNQ4P56696 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
KCNQ4P56696 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
KCNQ4P56696 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
KCNQ4P56696 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
KCNQ4P56696 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
KCNQ4P56696 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
KCNQ4P56696 MIR4449-201ENST00000578365 66 ntBASIC35.52■■■■□ 3.28
KCNQ4P56696 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
KCNQ4P56696 WASH5P-204ENST00000632292 975 ntBASIC35.51■■■■□ 3.28
KCNQ4P56696 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC35.51■■■■□ 3.27
KCNQ4P56696 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
KCNQ4P56696 DUX4L29-201ENST00000425409 679 ntBASIC35.5■■■■□ 3.27
KCNQ4P56696 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
KCNQ4P56696 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.27
KCNQ4P56696 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
KCNQ4P56696 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC35.45■■■■□ 3.27
KCNQ4P56696 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
KCNQ4P56696 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC35.44■■■■□ 3.26
KCNQ4P56696 RPS2-209ENST00000529806 993 ntTSL 3 BASIC35.44■■■■□ 3.26
KCNQ4P56696 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC35.43■■■■□ 3.26
KCNQ4P56696 AC021231.2-201ENST00000594613 730 ntBASIC35.43■■■■□ 3.26
KCNQ4P56696 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
KCNQ4P56696 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC35.4■■■■□ 3.26
KCNQ4P56696 MIR639-201ENST00000384974 98 ntBASIC35.4■■■■□ 3.26
KCNQ4P56696 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
KCNQ4P56696 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
KCNQ4P56696 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC35.38■■■■□ 3.25
KCNQ4P56696 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC35.37■■■■□ 3.25
KCNQ4P56696 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
KCNQ4P56696 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
KCNQ4P56696 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
KCNQ4P56696 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC35.34■■■■□ 3.25
KCNQ4P56696 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC35.34■■■■□ 3.25
KCNQ4P56696 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
KCNQ4P56696 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC35.33■■■■□ 3.25
KCNQ4P56696 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC35.33■■■■□ 3.25
KCNQ4P56696 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
KCNQ4P56696 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
KCNQ4P56696 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
KCNQ4P56696 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC35.29■■■■□ 3.24
KCNQ4P56696 AC016575.1-201ENST00000607026 382 ntBASIC35.29■■■■□ 3.24
KCNQ4P56696 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
KCNQ4P56696 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC35.27■■■■□ 3.24
KCNQ4P56696 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
KCNQ4P56696 MACF1-219ENST00000484793 834 ntTSL 2 BASIC35.26■■■■□ 3.24
KCNQ4P56696 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
KCNQ4P56696 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
KCNQ4P56696 RNF166-209ENST00000567844 633 ntTSL 5 BASIC35.24■■■■□ 3.23
KCNQ4P56696 MIR3648-2-201ENST00000581792 180 ntBASIC35.24■■■■□ 3.23
KCNQ4P56696 HSD17B1P1-201ENST00000590052 955 ntBASIC35.24■■■■□ 3.23
KCNQ4P56696 MIR3648-1-201ENST00000615959 180 ntBASIC35.24■■■■□ 3.23
KCNQ4P56696 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
KCNQ4P56696 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
KCNQ4P56696 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
KCNQ4P56696 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC35.22■■■■□ 3.23
KCNQ4P56696 CIB2-204ENST00000557846 934 ntTSL 3 BASIC35.22■■■■□ 3.23
KCNQ4P56696 GDI1-215ENST00000630693 786 ntTSL 4 BASIC35.21■■■■□ 3.23
KCNQ4P56696 CALM3-209ENST00000597743 577 ntTSL 4 BASIC35.18■■■■□ 3.22
KCNQ4P56696 MIR6090-201ENST00000622481 60 ntBASIC35.18■■■■□ 3.22
KCNQ4P56696 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
KCNQ4P56696 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC35.17■■■■□ 3.22
KCNQ4P56696 BRD4-212ENST00000630599 726 ntTSL 2 BASIC35.16■■■■□ 3.22
KCNQ4P56696 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
KCNQ4P56696 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC35.14■■■■□ 3.22
KCNQ4P56696 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC35.13■■■■□ 3.21
KCNQ4P56696 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
KCNQ4P56696 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC35.11■■■■□ 3.21
KCNQ4P56696 CR559946.2-201ENST00000623684 991 ntBASIC35.09■■■■□ 3.21
KCNQ4P56696 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC35.07■■■■□ 3.2
KCNQ4P56696 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
KCNQ4P56696 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC35.06■■■■□ 3.2
KCNQ4P56696 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC35.06■■■■□ 3.2
KCNQ4P56696 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
KCNQ4P56696 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
KCNQ4P56696 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
KCNQ4P56696 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC35.03■■■■□ 3.2
KCNQ4P56696 DUX4L11-201ENST00000611504 1267 ntBASIC35.03■■■■□ 3.2
KCNQ4P56696 DUX4L12-201ENST00000614593 1267 ntBASIC35.03■■■■□ 3.2
KCNQ4P56696 DUX4L14-201ENST00000621227 1267 ntBASIC35.03■■■■□ 3.2
KCNQ4P56696 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
KCNQ4P56696 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC34.98■■■■□ 3.19
KCNQ4P56696 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC34.98■■■■□ 3.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms