Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pdx1P52946 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pdx1P52946 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.26■■□□□ 1.63
Pdx1P52946 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pdx1P52946 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pdx1P52946 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pdx1P52946 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pdx1P52946 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.23■■□□□ 1.63
Pdx1P52946 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pdx1P52946 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.23■■□□□ 1.63
Pdx1P52946 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Pdx1P52946 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Pdx1P52946 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Pdx1P52946 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pdx1P52946 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pdx1P52946 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Pdx1P52946 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Pdx1P52946 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pdx1P52946 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pdx1P52946 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Pdx1P52946 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
Pdx1P52946 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pdx1P52946 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pdx1P52946 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pdx1P52946 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pdx1P52946 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.12■■□□□ 1.61
Pdx1P52946 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
Pdx1P52946 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.12■■□□□ 1.61
Pdx1P52946 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pdx1P52946 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Pdx1P52946 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pdx1P52946 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pdx1P52946 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pdx1P52946 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pdx1P52946 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Pdx1P52946 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pdx1P52946 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Pdx1P52946 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pdx1P52946 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.04■■□□□ 1.6
Pdx1P52946 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pdx1P52946 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pdx1P52946 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pdx1P52946 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Pdx1P52946 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Pdx1P52946 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pdx1P52946 Zfp131-205ENSMUST00000223812 663 ntBASIC25■■□□□ 1.59
Pdx1P52946 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25■■□□□ 1.59
Pdx1P52946 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25■■□□□ 1.59
Pdx1P52946 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pdx1P52946 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.99■■□□□ 1.59
Pdx1P52946 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pdx1P52946 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pdx1P52946 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pdx1P52946 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Pdx1P52946 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Pdx1P52946 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Pdx1P52946 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pdx1P52946 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Pdx1P52946 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pdx1P52946 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pdx1P52946 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.91■■□□□ 1.58
Pdx1P52946 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pdx1P52946 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.89■■□□□ 1.58
Pdx1P52946 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pdx1P52946 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
Pdx1P52946 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.87■■□□□ 1.57
Pdx1P52946 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pdx1P52946 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pdx1P52946 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Pdx1P52946 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pdx1P52946 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.85■■□□□ 1.57
Pdx1P52946 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pdx1P52946 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Pdx1P52946 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Pdx1P52946 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.82■■□□□ 1.56
Pdx1P52946 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pdx1P52946 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pdx1P52946 Zxda-201ENSMUST00000117281 2621 ntBASIC24.81■■□□□ 1.56
Pdx1P52946 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Pdx1P52946 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Pdx1P52946 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pdx1P52946 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pdx1P52946 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pdx1P52946 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pdx1P52946 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pdx1P52946 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pdx1P52946 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pdx1P52946 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.75■■□□□ 1.55
Pdx1P52946 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pdx1P52946 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pdx1P52946 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pdx1P52946 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Pdx1P52946 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pdx1P52946 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Pdx1P52946 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Pdx1P52946 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pdx1P52946 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Pdx1P52946 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.69■■□□□ 1.54
Pdx1P52946 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Pdx1P52946 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 7.5 ms