Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd27P41272 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
Cd27P41272 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.59■□□□□ 0.89
Cd27P41272 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cd27P41272 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cd27P41272 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.57■□□□□ 0.88
Cd27P41272 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd27P41272 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cd27P41272 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd27P41272 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd27P41272 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd27P41272 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd27P41272 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cd27P41272 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd27P41272 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd27P41272 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd27P41272 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd27P41272 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.53■□□□□ 0.88
Cd27P41272 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cd27P41272 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd27P41272 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cd27P41272 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.51■□□□□ 0.87
Cd27P41272 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cd27P41272 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd27P41272 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd27P41272 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd27P41272 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Cd27P41272 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd27P41272 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.45■□□□□ 0.86
Cd27P41272 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd27P41272 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd27P41272 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.44■□□□□ 0.86
Cd27P41272 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cd27P41272 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd27P41272 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd27P41272 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cd27P41272 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cd27P41272 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd27P41272 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cd27P41272 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd27P41272 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Cd27P41272 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd27P41272 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cd27P41272 Zfp131-205ENSMUST00000223812 663 ntBASIC20.39■□□□□ 0.85
Cd27P41272 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cd27P41272 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cd27P41272 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cd27P41272 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd27P41272 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd27P41272 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cd27P41272 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cd27P41272 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.35■□□□□ 0.85
Cd27P41272 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cd27P41272 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd27P41272 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Cd27P41272 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cd27P41272 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cd27P41272 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd27P41272 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cd27P41272 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.29■□□□□ 0.84
Cd27P41272 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cd27P41272 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd27P41272 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd27P41272 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd27P41272 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd27P41272 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cd27P41272 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Cd27P41272 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.25■□□□□ 0.83
Cd27P41272 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cd27P41272 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cd27P41272 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.24■□□□□ 0.83
Cd27P41272 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd27P41272 Zxda-201ENSMUST00000117281 2621 ntBASIC20.23■□□□□ 0.83
Cd27P41272 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cd27P41272 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd27P41272 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd27P41272 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd27P41272 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd27P41272 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd27P41272 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cd27P41272 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd27P41272 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cd27P41272 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cd27P41272 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cd27P41272 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.19■□□□□ 0.82
Cd27P41272 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd27P41272 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cd27P41272 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd27P41272 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cd27P41272 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd27P41272 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.16■□□□□ 0.82
Cd27P41272 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cd27P41272 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd27P41272 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cd27P41272 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cd27P41272 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cd27P41272 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd27P41272 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.14■□□□□ 0.81
Cd27P41272 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cd27P41272 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms