Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 ERF2YLR246W 1080 nt13.96□□□□□ -0.17
PTP3P40048 YIR016WYIR016W 798 nt13.95□□□□□ -0.18
PTP3P40048 RET2YFR051C 1641 nt13.94□□□□□ -0.18
PTP3P40048 SHM2YLR058C 1410 nt13.94□□□□□ -0.18
PTP3P40048 YLR349WYLR349W 507 nt13.92□□□□□ -0.18
PTP3P40048 SGT2YOR007C 1041 nt13.91□□□□□ -0.18
PTP3P40048 ADH7YCR105W 1086 nt13.9□□□□□ -0.18
PTP3P40048 PAU15YIR041W 375 nt13.89□□□□□ -0.19
PTP3P40048 CRR1YLR213C 1269 nt13.89□□□□□ -0.19
PTP3P40048 MRP20YDR405W 792 nt13.86□□□□□ -0.19
PTP3P40048 YJL107CYJL107C 1164 nt13.86□□□□□ -0.19
PTP3P40048 SNG1YGR197C 1644 nt13.85□□□□□ -0.19
PTP3P40048 THP3YPR045C 1413 nt13.84□□□□□ -0.19
PTP3P40048 YEL074WYEL074W 339 nt13.81□□□□□ -0.2
PTP3P40048 LSM12YHR121W 564 nt13.8□□□□□ -0.2
PTP3P40048 NIT1YIL164C 600 nt13.8□□□□□ -0.2
PTP3P40048 COQ2YNR041C 1119 nt13.8□□□□□ -0.2
PTP3P40048 MIC10YCL057C-A 294 nt13.8□□□□□ -0.2
PTP3P40048 XDJ1YLR090W 1380 nt13.8□□□□□ -0.2
PTP3P40048 BNS1YGR230W 414 nt13.79□□□□□ -0.2
PTP3P40048 HEM12YDR047W 1089 nt13.78□□□□□ -0.2
PTP3P40048 YLR279WYLR279W 390 nt13.78□□□□□ -0.2
PTP3P40048 YTH1YPR107C 627 nt13.78□□□□□ -0.2
PTP3P40048 YHL050CYHL050C 2094 nt13.77□□□□□ -0.21
PTP3P40048 YAL016C-BYAL016C-B 186 nt13.76□□□□□ -0.21
PTP3P40048 SDH5YOL071W 489 nt13.75□□□□□ -0.21
PTP3P40048 STD1YOR047C 1335 nt13.74□□□□□ -0.21
PTP3P40048 RSM23YGL129C 1353 nt13.73□□□□□ -0.21
PTP3P40048 AST1YBL069W 1290 nt13.71□□□□□ -0.21
PTP3P40048 FUN14YAL008W 597 nt13.7□□□□□ -0.22
PTP3P40048 YGL118CYGL118C 438 nt13.69□□□□□ -0.22
PTP3P40048 GDH3YAL062W 1374 nt13.68□□□□□ -0.22
PTP3P40048 PUS5YLR165C 765 nt13.67□□□□□ -0.22
PTP3P40048 ATG17YLR423C 1254 nt13.66□□□□□ -0.22
PTP3P40048 YLR437C-AYLR437C-A 228 nt13.66□□□□□ -0.22
PTP3P40048 CAB5YDR196C 726 nt13.65□□□□□ -0.22
PTP3P40048 FHN1YGR131W 525 nt13.65□□□□□ -0.22
PTP3P40048 PHO92YDR374C 921 nt13.64□□□□□ -0.23
PTP3P40048 YJL195CYJL195C 702 nt13.64□□□□□ -0.23
PTP3P40048 GPN2YOR262W 1044 nt13.64□□□□□ -0.23
PTP3P40048 REC114YMR133W 1287 nt13.62□□□□□ -0.23
PTP3P40048 RAD23YEL037C 1197 nt13.61□□□□□ -0.23
PTP3P40048 MOD5YOR274W 1287 nt13.61□□□□□ -0.23
PTP3P40048 HOS2YGL194C 1359 nt13.6□□□□□ -0.23
PTP3P40048 SFA1YDL168W 1161 nt13.6□□□□□ -0.23
PTP3P40048 PEX27YOR193W 1131 nt13.59□□□□□ -0.23
PTP3P40048 FRE6YLL051C 2139 nt13.58□□□□□ -0.23
PTP3P40048 RPL4BYDR012W 1089 nt13.58□□□□□ -0.24
PTP3P40048 YHL044WYHL044W 708 nt13.58□□□□□ -0.24
PTP3P40048 FAF1YIL019W 1041 nt13.58□□□□□ -0.24
PTP3P40048 RPL4AYBR031W 1089 nt13.58□□□□□ -0.24
PTP3P40048 YLR036CYLR036C 612 nt13.57□□□□□ -0.24
PTP3P40048 tS(GCU)LtS(GCU)L 80 nt13.55□□□□□ -0.24
PTP3P40048 SSA4YER103W 1929 nt13.54□□□□□ -0.24
PTP3P40048 YHL019W-AYHL019W-A 594 nt13.54□□□□□ -0.24
PTP3P40048 BNA2YJR078W 1362 nt13.54□□□□□ -0.24
PTP3P40048 ESS1YJR017C 513 nt13.53□□□□□ -0.24
PTP3P40048 MPC1YGL080W 393 nt13.52□□□□□ -0.25
PTP3P40048 RPS14BYJL191W 417 nt13.52□□□□□ -0.25
PTP3P40048 LYS4YDR234W 2082 nt13.52□□□□□ -0.25
PTP3P40048 NAT5YOR253W 531 nt13.5□□□□□ -0.25
PTP3P40048 YML079WYML079W 606 nt13.47□□□□□ -0.25
PTP3P40048 RIB3YDR487C 627 nt13.46□□□□□ -0.25
PTP3P40048 PIC2YER053C 903 nt13.45□□□□□ -0.26
PTP3P40048 YGR012WYGR012W 1182 nt13.45□□□□□ -0.26
PTP3P40048 CPD1YGR247W 720 nt13.45□□□□□ -0.26
PTP3P40048 ADH1YOL086C 1047 nt13.44□□□□□ -0.26
PTP3P40048 AVT6YER119C 1347 nt13.43□□□□□ -0.26
PTP3P40048 MPS2YGL075C 1164 nt13.43□□□□□ -0.26
PTP3P40048 MIC12YBR262C 321 nt13.43□□□□□ -0.26
PTP3P40048 YHP1YDR451C 1062 nt13.42□□□□□ -0.26
PTP3P40048 YMR306C-AYMR306C-A 390 nt13.42□□□□□ -0.26
PTP3P40048 KDX1YKL161C 1302 nt13.41□□□□□ -0.26
PTP3P40048 GTT3YEL017W 1014 nt13.4□□□□□ -0.26
PTP3P40048 FAR3YMR052W 615 nt13.4□□□□□ -0.26
PTP3P40048 PUP1YOR157C 786 nt13.4□□□□□ -0.26
PTP3P40048 HHO1YPL127C 777 nt13.4□□□□□ -0.26
PTP3P40048 COX3Q0275 810 nt13.39□□□□□ -0.27
PTP3P40048 ARC19YKL013C 516 nt13.39□□□□□ -0.27
PTP3P40048 TSC10YBR265W 963 nt13.38□□□□□ -0.27
PTP3P40048 ARP6YLR085C 1317 nt13.38□□□□□ -0.27
PTP3P40048 YEL008WYEL008W 381 nt13.37□□□□□ -0.27
PTP3P40048 UTH1YKR042W 1098 nt13.37□□□□□ -0.27
PTP3P40048 SEN2YLR105C 1134 nt13.37□□□□□ -0.27
PTP3P40048 APM1YPL259C 1428 nt13.37□□□□□ -0.27
PTP3P40048 YGR201CYGR201C 678 nt13.36□□□□□ -0.27
PTP3P40048 COX16YJL003W 357 nt13.36□□□□□ -0.27
PTP3P40048 MRPL36YBR122C 534 nt13.36□□□□□ -0.27
PTP3P40048 NCP1YHR042W 2076 nt13.35□□□□□ -0.27
PTP3P40048 UBC12YLR306W 567 nt13.35□□□□□ -0.27
PTP3P40048 ICE2YIL090W 1476 nt13.35□□□□□ -0.27
PTP3P40048 YCR102CYCR102C 1107 nt13.34□□□□□ -0.27
PTP3P40048 YMR147WYMR147W 672 nt13.34□□□□□ -0.27
PTP3P40048 NAP1YKR048C 1254 nt13.33□□□□□ -0.28
PTP3P40048 YHR056W-AYHR056W-A 435 nt13.31□□□□□ -0.28
PTP3P40048 SED5YLR026C 1023 nt13.31□□□□□ -0.28
PTP3P40048 RUF21RUF21 707 nt13.31□□□□□ -0.28
PTP3P40048 SHH4YLR164W 507 nt13.29□□□□□ -0.28
PTP3P40048 GOR1YNL274C 1053 nt13.29□□□□□ -0.28
PTP3P40048 TOM6YOR045W 186 nt13.29□□□□□ -0.28
Retrieved 100 of 7,029 protein–RNA pairs in 81.5 ms