Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxa3P35584 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxa3P35584 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxa3P35584 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxa3P35584 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Foxa3P35584 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxa3P35584 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxa3P35584 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxa3P35584 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxa3P35584 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Foxa3P35584 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Foxa3P35584 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxa3P35584 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Foxa3P35584 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Foxa3P35584 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Foxa3P35584 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Foxa3P35584 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.07■□□□□ 0.96
Foxa3P35584 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.07■□□□□ 0.96
Foxa3P35584 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.06■□□□□ 0.96
Foxa3P35584 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.06■□□□□ 0.96
Foxa3P35584 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Foxa3P35584 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Foxa3P35584 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Foxa3P35584 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Foxa3P35584 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxa3P35584 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxa3P35584 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.03■□□□□ 0.96
Foxa3P35584 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Foxa3P35584 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Foxa3P35584 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Foxa3P35584 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Foxa3P35584 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Foxa3P35584 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Foxa3P35584 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Foxa3P35584 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Foxa3P35584 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.99■□□□□ 0.95
Foxa3P35584 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxa3P35584 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxa3P35584 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.98■□□□□ 0.95
Foxa3P35584 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxa3P35584 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxa3P35584 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.97■□□□□ 0.95
Foxa3P35584 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Foxa3P35584 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxa3P35584 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxa3P35584 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Foxa3P35584 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxa3P35584 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxa3P35584 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Foxa3P35584 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.94■□□□□ 0.94
Foxa3P35584 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxa3P35584 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxa3P35584 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxa3P35584 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Foxa3P35584 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxa3P35584 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Foxa3P35584 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Foxa3P35584 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.89■□□□□ 0.93
Foxa3P35584 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxa3P35584 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxa3P35584 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxa3P35584 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxa3P35584 Rab21-202ENSMUST00000218831 843 ntBASIC20.88■□□□□ 0.93
Foxa3P35584 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Foxa3P35584 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Foxa3P35584 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Foxa3P35584 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Foxa3P35584 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Foxa3P35584 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Foxa3P35584 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Foxa3P35584 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Foxa3P35584 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Foxa3P35584 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxa3P35584 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Foxa3P35584 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Foxa3P35584 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Foxa3P35584 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxa3P35584 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxa3P35584 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxa3P35584 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Foxa3P35584 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxa3P35584 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxa3P35584 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Foxa3P35584 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxa3P35584 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Foxa3P35584 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Foxa3P35584 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxa3P35584 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Foxa3P35584 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Foxa3P35584 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxa3P35584 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxa3P35584 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxa3P35584 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Foxa3P35584 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Foxa3P35584 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxa3P35584 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxa3P35584 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Foxa3P35584 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxa3P35584 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Foxa3P35584 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms