Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SAA4P35542 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SAA4P35542 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.04■■□□□ 1.12
SAA4P35542 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SAA4P35542 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SAA4P35542 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SAA4P35542 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SAA4P35542 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SAA4P35542 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SAA4P35542 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.02■■□□□ 1.12
SAA4P35542 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22■■□□□ 1.11
SAA4P35542 AP006261.1-201ENST00000584783 668 ntBASIC22■■□□□ 1.11
SAA4P35542 AC120057.4-201ENST00000624722 1615 ntBASIC21.99■■□□□ 1.11
SAA4P35542 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SAA4P35542 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SAA4P35542 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.98■■□□□ 1.11
SAA4P35542 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SAA4P35542 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SAA4P35542 AL162393.1-201ENST00000437852 946 ntBASIC21.97■■□□□ 1.11
SAA4P35542 RPS2P35-201ENST00000443417 897 ntBASIC21.97■■□□□ 1.11
SAA4P35542 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.97■■□□□ 1.11
SAA4P35542 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SAA4P35542 MIR762-201ENST00000390236 83 ntBASIC21.95■■□□□ 1.1
SAA4P35542 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.94■■□□□ 1.1
SAA4P35542 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.94■■□□□ 1.1
SAA4P35542 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SAA4P35542 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.93■■□□□ 1.1
SAA4P35542 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SAA4P35542 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.93■■□□□ 1.1
SAA4P35542 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SAA4P35542 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.92■■□□□ 1.1
SAA4P35542 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SAA4P35542 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SAA4P35542 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
SAA4P35542 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SAA4P35542 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
SAA4P35542 MIR3665-201ENST00000578708 105 ntBASIC21.9■■□□□ 1.1
SAA4P35542 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.9■■□□□ 1.1
SAA4P35542 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SAA4P35542 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SAA4P35542 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SAA4P35542 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SAA4P35542 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.89■■□□□ 1.09
SAA4P35542 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SAA4P35542 AC005559.1-201ENST00000589661 871 ntBASIC21.88■■□□□ 1.09
SAA4P35542 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SAA4P35542 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SAA4P35542 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SAA4P35542 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SAA4P35542 DUX4L28-201ENST00000623687 678 ntBASIC21.86■■□□□ 1.09
SAA4P35542 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SAA4P35542 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
SAA4P35542 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SAA4P35542 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SAA4P35542 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.82■■□□□ 1.08
SAA4P35542 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SAA4P35542 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SAA4P35542 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SAA4P35542 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SAA4P35542 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SAA4P35542 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SAA4P35542 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SAA4P35542 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SAA4P35542 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.79■■□□□ 1.08
SAA4P35542 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SAA4P35542 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SAA4P35542 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.78■■□□□ 1.08
SAA4P35542 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SAA4P35542 AC087741.3-201ENST00000624270 1347 ntBASIC21.78■■□□□ 1.08
SAA4P35542 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SAA4P35542 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SAA4P35542 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SAA4P35542 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.76■■□□□ 1.07
SAA4P35542 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.76■■□□□ 1.07
SAA4P35542 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SAA4P35542 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.74■■□□□ 1.07
SAA4P35542 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SAA4P35542 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SAA4P35542 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SAA4P35542 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.73■■□□□ 1.07
SAA4P35542 AC044849.2-201ENST00000606596 710 ntBASIC21.72■■□□□ 1.07
SAA4P35542 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SAA4P35542 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SAA4P35542 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SAA4P35542 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
SAA4P35542 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SAA4P35542 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SAA4P35542 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SAA4P35542 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SAA4P35542 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.69■■□□□ 1.06
SAA4P35542 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SAA4P35542 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SAA4P35542 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SAA4P35542 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SAA4P35542 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SAA4P35542 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.68■■□□□ 1.06
SAA4P35542 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SAA4P35542 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.66■■□□□ 1.06
SAA4P35542 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SAA4P35542 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms