Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hes1P35428 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hes1P35428 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hes1P35428 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hes1P35428 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hes1P35428 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hes1P35428 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hes1P35428 Zxda-201ENSMUST00000117281 2621 ntBASIC20.52■□□□□ 0.87
Hes1P35428 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Hes1P35428 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.5■□□□□ 0.87
Hes1P35428 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hes1P35428 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.48■□□□□ 0.87
Hes1P35428 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hes1P35428 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hes1P35428 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hes1P35428 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hes1P35428 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hes1P35428 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hes1P35428 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hes1P35428 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hes1P35428 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hes1P35428 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hes1P35428 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Hes1P35428 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hes1P35428 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hes1P35428 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hes1P35428 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Hes1P35428 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hes1P35428 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hes1P35428 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Hes1P35428 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hes1P35428 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.41■□□□□ 0.86
Hes1P35428 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.41■□□□□ 0.86
Hes1P35428 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hes1P35428 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hes1P35428 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hes1P35428 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hes1P35428 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hes1P35428 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Hes1P35428 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hes1P35428 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hes1P35428 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hes1P35428 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hes1P35428 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hes1P35428 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hes1P35428 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hes1P35428 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hes1P35428 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hes1P35428 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.33■□□□□ 0.85
Hes1P35428 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hes1P35428 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hes1P35428 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hes1P35428 Zfp131-205ENSMUST00000223812 663 ntBASIC20.32■□□□□ 0.84
Hes1P35428 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hes1P35428 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hes1P35428 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hes1P35428 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.3■□□□□ 0.84
Hes1P35428 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hes1P35428 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hes1P35428 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hes1P35428 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Hes1P35428 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hes1P35428 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Hes1P35428 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hes1P35428 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hes1P35428 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hes1P35428 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.26■□□□□ 0.83
Hes1P35428 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hes1P35428 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hes1P35428 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Hes1P35428 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hes1P35428 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hes1P35428 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.24■□□□□ 0.83
Hes1P35428 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.24■□□□□ 0.83
Hes1P35428 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hes1P35428 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hes1P35428 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hes1P35428 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hes1P35428 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.23■□□□□ 0.83
Hes1P35428 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hes1P35428 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hes1P35428 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hes1P35428 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hes1P35428 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Hes1P35428 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.19■□□□□ 0.82
Hes1P35428 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hes1P35428 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hes1P35428 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.18■□□□□ 0.82
Hes1P35428 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hes1P35428 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hes1P35428 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hes1P35428 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hes1P35428 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Hes1P35428 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hes1P35428 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hes1P35428 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hes1P35428 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hes1P35428 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hes1P35428 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hes1P35428 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms