Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Rab3dP35276 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Rab3dP35276 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab3dP35276 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab3dP35276 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rab3dP35276 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.96■□□□□ 0.95
Rab3dP35276 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Rab3dP35276 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.93■□□□□ 0.94
Rab3dP35276 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.93■□□□□ 0.94
Rab3dP35276 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab3dP35276 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab3dP35276 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab3dP35276 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab3dP35276 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.9■□□□□ 0.94
Rab3dP35276 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab3dP35276 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rab3dP35276 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab3dP35276 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rab3dP35276 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rab3dP35276 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.87■□□□□ 0.93
Rab3dP35276 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab3dP35276 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.86■□□□□ 0.93
Rab3dP35276 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab3dP35276 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rab3dP35276 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab3dP35276 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab3dP35276 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab3dP35276 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rab3dP35276 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab3dP35276 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab3dP35276 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab3dP35276 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab3dP35276 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab3dP35276 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rab3dP35276 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab3dP35276 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rab3dP35276 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab3dP35276 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab3dP35276 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab3dP35276 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.8■□□□□ 0.92
Rab3dP35276 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rab3dP35276 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab3dP35276 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rab3dP35276 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab3dP35276 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rab3dP35276 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rab3dP35276 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Rab3dP35276 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab3dP35276 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rab3dP35276 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Rab3dP35276 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rab3dP35276 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rab3dP35276 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rab3dP35276 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab3dP35276 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab3dP35276 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab3dP35276 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rab3dP35276 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab3dP35276 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab3dP35276 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.71■□□□□ 0.91
Rab3dP35276 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rab3dP35276 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab3dP35276 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rab3dP35276 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rab3dP35276 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.7■□□□□ 0.9
Rab3dP35276 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab3dP35276 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rab3dP35276 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rab3dP35276 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab3dP35276 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab3dP35276 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab3dP35276 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab3dP35276 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rab3dP35276 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rab3dP35276 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab3dP35276 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab3dP35276 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rab3dP35276 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rab3dP35276 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rab3dP35276 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab3dP35276 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab3dP35276 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Rab3dP35276 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.62■□□□□ 0.89
Rab3dP35276 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rab3dP35276 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab3dP35276 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rab3dP35276 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab3dP35276 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Rab3dP35276 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3dP35276 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab3dP35276 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab3dP35276 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rab3dP35276 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.58■□□□□ 0.89
Rab3dP35276 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Rab3dP35276 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab3dP35276 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab3dP35276 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab3dP35276 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.55■□□□□ 0.88
Rab3dP35276 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.55■□□□□ 0.88
Rab3dP35276 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms