Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ccl6P27784 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccl6P27784 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccl6P27784 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccl6P27784 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ccl6P27784 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccl6P27784 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
Ccl6P27784 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccl6P27784 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccl6P27784 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccl6P27784 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccl6P27784 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccl6P27784 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccl6P27784 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccl6P27784 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ccl6P27784 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl6P27784 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl6P27784 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl6P27784 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl6P27784 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl6P27784 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ccl6P27784 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.49■□□□□ 0.71
Ccl6P27784 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccl6P27784 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccl6P27784 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl6P27784 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl6P27784 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl6P27784 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl6P27784 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl6P27784 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl6P27784 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl6P27784 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl6P27784 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl6P27784 Gm16148-201ENSMUST00000119653 893 ntBASIC19.44■□□□□ 0.7
Ccl6P27784 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl6P27784 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.43■□□□□ 0.7
Ccl6P27784 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccl6P27784 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl6P27784 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl6P27784 Zxda-201ENSMUST00000117281 2621 ntBASIC19.39■□□□□ 0.7
Ccl6P27784 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccl6P27784 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ccl6P27784 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccl6P27784 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccl6P27784 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.37■□□□□ 0.69
Ccl6P27784 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl6P27784 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl6P27784 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.36■□□□□ 0.69
Ccl6P27784 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ccl6P27784 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.36■□□□□ 0.69
Ccl6P27784 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl6P27784 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl6P27784 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccl6P27784 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl6P27784 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Ccl6P27784 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl6P27784 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ccl6P27784 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ccl6P27784 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ccl6P27784 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccl6P27784 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl6P27784 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccl6P27784 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl6P27784 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl6P27784 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl6P27784 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccl6P27784 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl6P27784 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.28■□□□□ 0.68
Ccl6P27784 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.28■□□□□ 0.68
Ccl6P27784 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccl6P27784 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccl6P27784 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccl6P27784 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccl6P27784 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccl6P27784 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl6P27784 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl6P27784 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ccl6P27784 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccl6P27784 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.23■□□□□ 0.67
Ccl6P27784 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Ccl6P27784 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccl6P27784 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Ccl6P27784 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl6P27784 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl6P27784 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccl6P27784 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl6P27784 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl6P27784 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccl6P27784 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl6P27784 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ccl6P27784 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl6P27784 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl6P27784 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl6P27784 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl6P27784 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccl6P27784 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl6P27784 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl6P27784 Amer2-203ENSMUST00000225247 2662 ntBASIC19.15■□□□□ 0.66
Ccl6P27784 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ccl6P27784 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 170.1 ms