Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm24970-201ENSMUST00000175582 82 ntBASIC27.77■■■□□ 2.04
Pde6bP23440 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pde6bP23440 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Pde6bP23440 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.75■■■□□ 2.03
Pde6bP23440 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Pde6bP23440 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Pde6bP23440 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.74■■■□□ 2.03
Pde6bP23440 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.71■■■□□ 2.03
Pde6bP23440 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
Pde6bP23440 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
Pde6bP23440 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Pde6bP23440 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Pde6bP23440 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Pde6bP23440 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Pde6bP23440 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.68■■■□□ 2.02
Pde6bP23440 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pde6bP23440 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Pde6bP23440 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Pde6bP23440 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Pde6bP23440 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Pde6bP23440 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Pde6bP23440 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Pde6bP23440 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.64■■■□□ 2.02
Pde6bP23440 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.01
Pde6bP23440 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.62■■■□□ 2.01
Pde6bP23440 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pde6bP23440 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pde6bP23440 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.59■■■□□ 2.01
Pde6bP23440 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pde6bP23440 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pde6bP23440 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.55■■■□□ 2
Pde6bP23440 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Pde6bP23440 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.53■■■□□ 2
Pde6bP23440 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.52■■■□□ 2
Pde6bP23440 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pde6bP23440 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pde6bP23440 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Pde6bP23440 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.47■■□□□ 1.99
Pde6bP23440 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Pde6bP23440 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Pde6bP23440 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.44■■□□□ 1.98
Pde6bP23440 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pde6bP23440 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Pde6bP23440 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pde6bP23440 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pde6bP23440 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.39■■□□□ 1.98
Pde6bP23440 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Pde6bP23440 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pde6bP23440 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
Pde6bP23440 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pde6bP23440 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pde6bP23440 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Pde6bP23440 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Pde6bP23440 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.35■■□□□ 1.97
Pde6bP23440 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.35■■□□□ 1.97
Pde6bP23440 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pde6bP23440 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Pde6bP23440 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
Pde6bP23440 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.33■■□□□ 1.97
Pde6bP23440 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.33■■□□□ 1.97
Pde6bP23440 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pde6bP23440 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pde6bP23440 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Pde6bP23440 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pde6bP23440 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pde6bP23440 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Pde6bP23440 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pde6bP23440 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Pde6bP23440 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pde6bP23440 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.27■■□□□ 1.96
Pde6bP23440 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pde6bP23440 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Pde6bP23440 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Pde6bP23440 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Pde6bP23440 Gm8503-201ENSMUST00000118131 455 ntBASIC27.25■■□□□ 1.95
Pde6bP23440 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pde6bP23440 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
Pde6bP23440 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pde6bP23440 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.22■■□□□ 1.95
Pde6bP23440 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.22■■□□□ 1.95
Pde6bP23440 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.22■■□□□ 1.95
Pde6bP23440 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pde6bP23440 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Pde6bP23440 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.22■■□□□ 1.95
Pde6bP23440 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pde6bP23440 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pde6bP23440 Gm6821-201ENSMUST00000107540 542 ntBASIC27.21■■□□□ 1.95
Pde6bP23440 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Pde6bP23440 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Pde6bP23440 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.19■■□□□ 1.94
Pde6bP23440 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
Pde6bP23440 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.18■■□□□ 1.94
Pde6bP23440 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.17■■□□□ 1.94
Pde6bP23440 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pde6bP23440 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Pde6bP23440 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pde6bP23440 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Pde6bP23440 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pde6bP23440 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pde6bP23440 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms