Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04940 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
P04940 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.79■□□□□ 0.92
P04940 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04940 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04940 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04940 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P04940 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04940 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04940 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
P04940 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04940 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04940 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P04940 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.75■□□□□ 0.91
P04940 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P04940 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04940 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
P04940 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.74■□□□□ 0.91
P04940 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04940 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
P04940 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
P04940 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P04940 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
P04940 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
P04940 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
P04940 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
P04940 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
P04940 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04940 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
P04940 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.69■□□□□ 0.9
P04940 Zxda-201ENSMUST00000117281 2621 ntBASIC20.68■□□□□ 0.9
P04940 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04940 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.67■□□□□ 0.9
P04940 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
P04940 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
P04940 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
P04940 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P04940 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
P04940 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
P04940 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04940 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04940 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P04940 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P04940 Gm16148-201ENSMUST00000119653 893 ntBASIC20.62■□□□□ 0.89
P04940 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04940 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.62■□□□□ 0.89
P04940 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P04940 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04940 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
P04940 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04940 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
P04940 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.57■□□□□ 0.88
P04940 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04940 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.55■□□□□ 0.88
P04940 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.55■□□□□ 0.88
P04940 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
P04940 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04940 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04940 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04940 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
P04940 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
P04940 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
P04940 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
P04940 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
P04940 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
P04940 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P04940 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
P04940 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P04940 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
P04940 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
P04940 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
P04940 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
P04940 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
P04940 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
P04940 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P04940 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
P04940 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
P04940 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
P04940 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.42■□□□□ 0.86
P04940 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
P04940 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P04940 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
P04940 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
P04940 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
P04940 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
P04940 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P04940 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P04940 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04940 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P04940 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.37■□□□□ 0.85
P04940 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.36■□□□□ 0.85
P04940 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
P04940 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
P04940 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04940 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04940 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
P04940 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P04940 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.34■□□□□ 0.85
P04940 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
P04940 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms