Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC044849.2-201ENST00000606596 710 ntBASIC30.1■■■□□ 2.41
CHRNA1P02708 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CHRNA1P02708 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHRNA1P02708 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
CHRNA1P02708 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.08■■■□□ 2.41
CHRNA1P02708 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHRNA1P02708 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHRNA1P02708 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
CHRNA1P02708 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHRNA1P02708 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.05■■■□□ 2.4
CHRNA1P02708 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.03■■■□□ 2.4
CHRNA1P02708 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHRNA1P02708 MIR7108-201ENST00000614319 87 ntBASIC30.02■■■□□ 2.4
CHRNA1P02708 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHRNA1P02708 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30■■■□□ 2.39
CHRNA1P02708 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30■■■□□ 2.39
CHRNA1P02708 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.99■■■□□ 2.39
CHRNA1P02708 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHRNA1P02708 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.96■■■□□ 2.39
CHRNA1P02708 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHRNA1P02708 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CHRNA1P02708 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHRNA1P02708 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.94■■■□□ 2.38
CHRNA1P02708 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.94■■■□□ 2.38
CHRNA1P02708 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
CHRNA1P02708 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHRNA1P02708 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHRNA1P02708 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CHRNA1P02708 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.91■■■□□ 2.38
CHRNA1P02708 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CHRNA1P02708 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.91■■■□□ 2.38
CHRNA1P02708 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CHRNA1P02708 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.9■■■□□ 2.38
CHRNA1P02708 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHRNA1P02708 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.89■■■□□ 2.38
CHRNA1P02708 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CHRNA1P02708 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.87■■■□□ 2.37
CHRNA1P02708 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHRNA1P02708 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
CHRNA1P02708 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CHRNA1P02708 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHRNA1P02708 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CHRNA1P02708 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CHRNA1P02708 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHRNA1P02708 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHRNA1P02708 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHRNA1P02708 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.84■■■□□ 2.37
CHRNA1P02708 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CHRNA1P02708 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHRNA1P02708 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.83■■■□□ 2.37
CHRNA1P02708 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.83■■■□□ 2.37
CHRNA1P02708 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.83■■■□□ 2.37
CHRNA1P02708 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHRNA1P02708 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.82■■■□□ 2.36
CHRNA1P02708 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.81■■■□□ 2.36
CHRNA1P02708 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.8■■■□□ 2.36
CHRNA1P02708 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHRNA1P02708 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.8■■■□□ 2.36
CHRNA1P02708 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.8■■■□□ 2.36
CHRNA1P02708 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHRNA1P02708 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CHRNA1P02708 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHRNA1P02708 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHRNA1P02708 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHRNA1P02708 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHRNA1P02708 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHRNA1P02708 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.78■■■□□ 2.36
CHRNA1P02708 ZNRF2P2-203ENST00000454624 420 ntBASIC29.78■■■□□ 2.36
CHRNA1P02708 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHRNA1P02708 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.76■■■□□ 2.35
CHRNA1P02708 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CHRNA1P02708 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.75■■■□□ 2.35
CHRNA1P02708 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CHRNA1P02708 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.74■■■□□ 2.35
CHRNA1P02708 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.73■■■□□ 2.35
CHRNA1P02708 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CHRNA1P02708 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHRNA1P02708 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.71■■■□□ 2.35
CHRNA1P02708 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CHRNA1P02708 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.71■■■□□ 2.35
CHRNA1P02708 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CHRNA1P02708 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
CHRNA1P02708 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CHRNA1P02708 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.69■■■□□ 2.34
CHRNA1P02708 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CHRNA1P02708 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.68■■■□□ 2.34
CHRNA1P02708 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.68■■■□□ 2.34
CHRNA1P02708 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CHRNA1P02708 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
CHRNA1P02708 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.67■■■□□ 2.34
CHRNA1P02708 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.66■■■□□ 2.34
CHRNA1P02708 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CHRNA1P02708 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
CHRNA1P02708 HLA-V-202ENST00000446817 847 ntBASIC29.64■■■□□ 2.34
CHRNA1P02708 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CHRNA1P02708 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CHRNA1P02708 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
CHRNA1P02708 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CHRNA1P02708 DUX4L29-201ENST00000425409 679 ntBASIC29.63■■■□□ 2.33
CHRNA1P02708 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.63■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms