Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.6■■■□□ 2.49
CD4P01730 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CD4P01730 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
CD4P01730 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.55■■■□□ 2.48
CD4P01730 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CD4P01730 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.53■■■□□ 2.48
CD4P01730 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.53■■■□□ 2.48
CD4P01730 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CD4P01730 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CD4P01730 ZNRF2P2-203ENST00000454624 420 ntBASIC30.52■■■□□ 2.48
CD4P01730 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.52■■■□□ 2.48
CD4P01730 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.51■■■□□ 2.47
CD4P01730 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.51■■■□□ 2.47
CD4P01730 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
CD4P01730 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.49■■■□□ 2.47
CD4P01730 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CD4P01730 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CD4P01730 WASH5P-204ENST00000632292 975 ntBASIC30.45■■■□□ 2.47
CD4P01730 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.44■■■□□ 2.46
CD4P01730 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.44■■■□□ 2.46
CD4P01730 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CD4P01730 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CD4P01730 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.42■■■□□ 2.46
CD4P01730 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
CD4P01730 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CD4P01730 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.41■■■□□ 2.46
CD4P01730 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.41■■■□□ 2.46
CD4P01730 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CD4P01730 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
CD4P01730 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CD4P01730 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CD4P01730 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.37■■■□□ 2.45
CD4P01730 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CD4P01730 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
CD4P01730 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CD4P01730 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.31■■■□□ 2.44
CD4P01730 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.31■■■□□ 2.44
CD4P01730 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CD4P01730 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CD4P01730 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.28■■■□□ 2.44
CD4P01730 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
CD4P01730 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CD4P01730 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
CD4P01730 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CD4P01730 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CD4P01730 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CD4P01730 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.22■■■□□ 2.43
CD4P01730 DUX4L29-201ENST00000425409 679 ntBASIC30.22■■■□□ 2.43
CD4P01730 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CD4P01730 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.2■■■□□ 2.43
CD4P01730 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
CD4P01730 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CD4P01730 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.19■■■□□ 2.42
CD4P01730 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CD4P01730 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CD4P01730 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CD4P01730 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CD4P01730 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CD4P01730 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CD4P01730 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CD4P01730 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.14■■■□□ 2.42
CD4P01730 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CD4P01730 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.13■■■□□ 2.41
CD4P01730 MIR4449-201ENST00000578365 66 ntBASIC30.13■■■□□ 2.41
CD4P01730 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CD4P01730 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CD4P01730 AC021231.2-201ENST00000594613 730 ntBASIC30.12■■■□□ 2.41
CD4P01730 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CD4P01730 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CD4P01730 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
CD4P01730 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CD4P01730 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.1■■■□□ 2.41
CD4P01730 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
CD4P01730 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CD4P01730 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.41
CD4P01730 MIR639-201ENST00000384974 98 ntBASIC30.07■■■□□ 2.4
CD4P01730 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.07■■■□□ 2.4
CD4P01730 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.06■■■□□ 2.4
CD4P01730 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CD4P01730 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CD4P01730 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CD4P01730 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
CD4P01730 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CD4P01730 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.02■■■□□ 2.4
CD4P01730 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.02■■■□□ 2.4
CD4P01730 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CD4P01730 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.01■■■□□ 2.39
CD4P01730 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CD4P01730 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30■■■□□ 2.39
CD4P01730 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30■■■□□ 2.39
CD4P01730 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.99■■■□□ 2.39
CD4P01730 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CD4P01730 MIR6090-201ENST00000622481 60 ntBASIC29.95■■■□□ 2.39
CD4P01730 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CD4P01730 AC108673.1-201ENST00000510422 1159 ntBASIC29.94■■■□□ 2.38
CD4P01730 MIR3648-2-201ENST00000581792 180 ntBASIC29.94■■■□□ 2.38
CD4P01730 MIR3648-1-201ENST00000615959 180 ntBASIC29.94■■■□□ 2.38
CD4P01730 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CD4P01730 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.93■■■□□ 2.38
CD4P01730 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.92■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms