Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.03■■□□□ 1.92
SOD1P00441 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SOD1P00441 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.02■■□□□ 1.92
SOD1P00441 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SOD1P00441 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SOD1P00441 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SOD1P00441 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27■■□□□ 1.91
SOD1P00441 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SOD1P00441 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SOD1P00441 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.97■■□□□ 1.91
SOD1P00441 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
SOD1P00441 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
SOD1P00441 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
SOD1P00441 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SOD1P00441 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SOD1P00441 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
SOD1P00441 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.95■■□□□ 1.9
SOD1P00441 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.93■■□□□ 1.9
SOD1P00441 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SOD1P00441 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SOD1P00441 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SOD1P00441 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.9■■□□□ 1.9
SOD1P00441 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
SOD1P00441 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SOD1P00441 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SOD1P00441 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.87■■□□□ 1.89
SOD1P00441 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.86■■□□□ 1.89
SOD1P00441 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SOD1P00441 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SOD1P00441 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
SOD1P00441 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SOD1P00441 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SOD1P00441 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.82■■□□□ 1.88
SOD1P00441 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SOD1P00441 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SOD1P00441 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SOD1P00441 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.8■■□□□ 1.88
SOD1P00441 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SOD1P00441 MIR762-201ENST00000390236 83 ntBASIC26.79■■□□□ 1.88
SOD1P00441 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.79■■□□□ 1.88
SOD1P00441 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SOD1P00441 AL162393.1-201ENST00000437852 946 ntBASIC26.77■■□□□ 1.88
SOD1P00441 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.77■■□□□ 1.88
SOD1P00441 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SOD1P00441 AP006261.1-201ENST00000584783 668 ntBASIC26.76■■□□□ 1.87
SOD1P00441 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.76■■□□□ 1.87
SOD1P00441 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SOD1P00441 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.73■■□□□ 1.87
SOD1P00441 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SOD1P00441 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.73■■□□□ 1.87
SOD1P00441 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SOD1P00441 RPS2P35-201ENST00000443417 897 ntBASIC26.72■■□□□ 1.87
SOD1P00441 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SOD1P00441 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SOD1P00441 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SOD1P00441 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.7■■□□□ 1.86
SOD1P00441 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
SOD1P00441 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
SOD1P00441 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
SOD1P00441 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SOD1P00441 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.69■■□□□ 1.86
SOD1P00441 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SOD1P00441 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SOD1P00441 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SOD1P00441 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SOD1P00441 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.68■■□□□ 1.86
SOD1P00441 DUX4L28-201ENST00000623687 678 ntBASIC26.68■■□□□ 1.86
SOD1P00441 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
SOD1P00441 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
SOD1P00441 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SOD1P00441 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
SOD1P00441 AC005559.1-201ENST00000589661 871 ntBASIC26.65■■□□□ 1.86
SOD1P00441 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SOD1P00441 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
SOD1P00441 MIR3665-201ENST00000578708 105 ntBASIC26.64■■□□□ 1.86
SOD1P00441 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SOD1P00441 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.62■■□□□ 1.85
SOD1P00441 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SOD1P00441 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SOD1P00441 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SOD1P00441 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SOD1P00441 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SOD1P00441 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SOD1P00441 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SOD1P00441 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SOD1P00441 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.58■■□□□ 1.85
SOD1P00441 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SOD1P00441 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.57■■□□□ 1.84
SOD1P00441 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SOD1P00441 AL161658.1-201ENST00000623641 1967 ntBASIC26.57■■□□□ 1.84
SOD1P00441 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SOD1P00441 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SOD1P00441 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
SOD1P00441 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SOD1P00441 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SOD1P00441 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
SOD1P00441 AC087741.3-201ENST00000624270 1347 ntBASIC26.56■■□□□ 1.84
SOD1P00441 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SOD1P00441 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
SOD1P00441 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms