Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
GGPS1O95749 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.76■■■□□ 2.51
GGPS1O95749 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
GGPS1O95749 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
GGPS1O95749 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
GGPS1O95749 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
GGPS1O95749 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.74■■■□□ 2.51
GGPS1O95749 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.74■■■□□ 2.51
GGPS1O95749 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.73■■■□□ 2.51
GGPS1O95749 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
GGPS1O95749 AC005559.1-201ENST00000589661 871 ntBASIC30.72■■■□□ 2.51
GGPS1O95749 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
GGPS1O95749 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
GGPS1O95749 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.71■■■□□ 2.51
GGPS1O95749 AC087741.3-201ENST00000624270 1347 ntBASIC30.71■■■□□ 2.51
GGPS1O95749 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
GGPS1O95749 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.7■■■□□ 2.51
GGPS1O95749 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
GGPS1O95749 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.68■■■□□ 2.5
GGPS1O95749 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
GGPS1O95749 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.66■■■□□ 2.5
GGPS1O95749 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
GGPS1O95749 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
GGPS1O95749 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.65■■■□□ 2.5
GGPS1O95749 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
GGPS1O95749 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
GGPS1O95749 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
GGPS1O95749 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
GGPS1O95749 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.62■■■□□ 2.49
GGPS1O95749 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.61■■■□□ 2.49
GGPS1O95749 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
GGPS1O95749 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.61■■■□□ 2.49
GGPS1O95749 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
GGPS1O95749 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
GGPS1O95749 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
GGPS1O95749 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
GGPS1O95749 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.57■■■□□ 2.48
GGPS1O95749 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
GGPS1O95749 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
GGPS1O95749 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
GGPS1O95749 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
GGPS1O95749 AC044849.2-201ENST00000606596 710 ntBASIC30.55■■■□□ 2.48
GGPS1O95749 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.54■■■□□ 2.48
GGPS1O95749 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
GGPS1O95749 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
GGPS1O95749 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
GGPS1O95749 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
GGPS1O95749 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
GGPS1O95749 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
GGPS1O95749 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
GGPS1O95749 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
GGPS1O95749 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
GGPS1O95749 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.46■■■□□ 2.47
GGPS1O95749 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
GGPS1O95749 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
GGPS1O95749 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
GGPS1O95749 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.44■■■□□ 2.46
GGPS1O95749 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.44■■■□□ 2.46
GGPS1O95749 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.43■■■□□ 2.46
GGPS1O95749 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
GGPS1O95749 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
GGPS1O95749 ABHD17AP4-201ENST00000411545 909 ntBASIC30.41■■■□□ 2.46
GGPS1O95749 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
GGPS1O95749 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.4■■■□□ 2.46
GGPS1O95749 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
GGPS1O95749 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
GGPS1O95749 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
GGPS1O95749 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
GGPS1O95749 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
GGPS1O95749 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
GGPS1O95749 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
GGPS1O95749 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.38■■■□□ 2.45
GGPS1O95749 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
GGPS1O95749 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
GGPS1O95749 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
GGPS1O95749 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.34■■■□□ 2.45
GGPS1O95749 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.34■■■□□ 2.45
GGPS1O95749 AC120057.4-201ENST00000624722 1615 ntBASIC30.33■■■□□ 2.45
GGPS1O95749 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
GGPS1O95749 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
GGPS1O95749 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.3■■■□□ 2.44
GGPS1O95749 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
GGPS1O95749 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.3■■■□□ 2.44
GGPS1O95749 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
GGPS1O95749 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.3■■■□□ 2.44
GGPS1O95749 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
GGPS1O95749 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.28■■■□□ 2.44
GGPS1O95749 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.28■■■□□ 2.44
GGPS1O95749 MIR7108-201ENST00000614319 87 ntBASIC30.28■■■□□ 2.44
GGPS1O95749 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
GGPS1O95749 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
GGPS1O95749 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
GGPS1O95749 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.25■■■□□ 2.43
GGPS1O95749 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
GGPS1O95749 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.25■■■□□ 2.43
GGPS1O95749 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
GGPS1O95749 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.24■■■□□ 2.43
GGPS1O95749 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.24■■■□□ 2.43
GGPS1O95749 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.24■■■□□ 2.43
GGPS1O95749 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms