Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFRSF6BO95407 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF6BO95407 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFRSF6BO95407 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.74■□□□□ 0.75
TNFRSF6BO95407 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TNFRSF6BO95407 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFRSF6BO95407 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TNFRSF6BO95407 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF6BO95407 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFRSF6BO95407 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF6BO95407 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TNFRSF6BO95407 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.68■□□□□ 0.74
TNFRSF6BO95407 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF6BO95407 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TNFRSF6BO95407 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFRSF6BO95407 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF6BO95407 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF6BO95407 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFRSF6BO95407 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF6BO95407 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF6BO95407 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF6BO95407 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF6BO95407 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF6BO95407 AC015813.7-201ENST00000623294 581 ntBASIC19.64■□□□□ 0.73
TNFRSF6BO95407 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF6BO95407 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TNFRSF6BO95407 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TNFRSF6BO95407 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF6BO95407 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF6BO95407 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF6BO95407 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF6BO95407 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF6BO95407 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF6BO95407 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF6BO95407 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF6BO95407 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF6BO95407 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF6BO95407 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF6BO95407 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TNFRSF6BO95407 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF6BO95407 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF6BO95407 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.55■□□□□ 0.72
TNFRSF6BO95407 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.55■□□□□ 0.72
TNFRSF6BO95407 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF6BO95407 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF6BO95407 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.54■□□□□ 0.72
TNFRSF6BO95407 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF6BO95407 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TNFRSF6BO95407 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFRSF6BO95407 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF6BO95407 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF6BO95407 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF6BO95407 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.51■□□□□ 0.71
TNFRSF6BO95407 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF6BO95407 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFRSF6BO95407 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.5■□□□□ 0.71
TNFRSF6BO95407 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.5■□□□□ 0.71
TNFRSF6BO95407 ST7-AS1-201ENST00000456775 1889 ntBASIC19.5■□□□□ 0.71
TNFRSF6BO95407 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.49■□□□□ 0.71
TNFRSF6BO95407 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFRSF6BO95407 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TNFRSF6BO95407 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF6BO95407 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF6BO95407 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
TNFRSF6BO95407 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF6BO95407 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF6BO95407 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF6BO95407 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF6BO95407 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF6BO95407 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TNFRSF6BO95407 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
TNFRSF6BO95407 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFRSF6BO95407 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF6BO95407 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.42■□□□□ 0.7
TNFRSF6BO95407 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TNFRSF6BO95407 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF6BO95407 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TNFRSF6BO95407 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF6BO95407 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF6BO95407 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF6BO95407 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNFRSF6BO95407 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF6BO95407 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TNFRSF6BO95407 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF6BO95407 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFRSF6BO95407 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TNFRSF6BO95407 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF6BO95407 AC142086.6-201ENST00000621154 1765 ntBASIC19.38■□□□□ 0.69
TNFRSF6BO95407 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TNFRSF6BO95407 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF6BO95407 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TNFRSF6BO95407 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TNFRSF6BO95407 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF6BO95407 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFRSF6BO95407 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFRSF6BO95407 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF6BO95407 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF6BO95407 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFRSF6BO95407 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
TNFRSF6BO95407 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms