Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Hcn1O88704 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hcn1O88704 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hcn1O88704 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hcn1O88704 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hcn1O88704 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hcn1O88704 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hcn1O88704 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Hcn1O88704 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Hcn1O88704 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Hcn1O88704 Zfp131-205ENSMUST00000223812 663 ntBASIC23.89■■□□□ 1.41
Hcn1O88704 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hcn1O88704 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hcn1O88704 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Hcn1O88704 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Hcn1O88704 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hcn1O88704 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Hcn1O88704 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hcn1O88704 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Hcn1O88704 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Hcn1O88704 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.84■■□□□ 1.41
Hcn1O88704 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.83■■□□□ 1.4
Hcn1O88704 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
Hcn1O88704 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Hcn1O88704 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hcn1O88704 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Hcn1O88704 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hcn1O88704 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Hcn1O88704 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
Hcn1O88704 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hcn1O88704 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hcn1O88704 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hcn1O88704 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hcn1O88704 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Hcn1O88704 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hcn1O88704 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hcn1O88704 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hcn1O88704 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Hcn1O88704 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Hcn1O88704 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.72■■□□□ 1.39
Hcn1O88704 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Hcn1O88704 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hcn1O88704 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hcn1O88704 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hcn1O88704 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hcn1O88704 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hcn1O88704 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.68■■□□□ 1.38
Hcn1O88704 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Hcn1O88704 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.68■■□□□ 1.38
Hcn1O88704 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hcn1O88704 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.67■■□□□ 1.38
Hcn1O88704 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hcn1O88704 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.67■■□□□ 1.38
Hcn1O88704 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.67■■□□□ 1.38
Hcn1O88704 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hcn1O88704 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.66■■□□□ 1.38
Hcn1O88704 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
Hcn1O88704 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Hcn1O88704 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hcn1O88704 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hcn1O88704 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Hcn1O88704 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Hcn1O88704 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Hcn1O88704 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Hcn1O88704 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hcn1O88704 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.6■■□□□ 1.37
Hcn1O88704 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Hcn1O88704 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hcn1O88704 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Hcn1O88704 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Hcn1O88704 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.59■■□□□ 1.37
Hcn1O88704 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Hcn1O88704 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Hcn1O88704 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Hcn1O88704 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Hcn1O88704 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Hcn1O88704 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hcn1O88704 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Hcn1O88704 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
Hcn1O88704 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hcn1O88704 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hcn1O88704 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hcn1O88704 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Hcn1O88704 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Hcn1O88704 Amer2-203ENSMUST00000225247 2662 ntBASIC23.54■■□□□ 1.36
Hcn1O88704 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Hcn1O88704 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.53■■□□□ 1.36
Hcn1O88704 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Hcn1O88704 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Hcn1O88704 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Hcn1O88704 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.53■■□□□ 1.36
Hcn1O88704 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Hcn1O88704 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Hcn1O88704 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Hcn1O88704 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.51■■□□□ 1.35
Hcn1O88704 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Hcn1O88704 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Hcn1O88704 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hcn1O88704 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Hcn1O88704 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms