Protein–RNA interactions for Protein: O75525

KHDRBS3, KH domain-containing, RNA-binding, signal transduction-associated protein 3, humanhuman

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3O75525 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
KHDRBS3O75525 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
KHDRBS3O75525 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
KHDRBS3O75525 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
KHDRBS3O75525 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
KHDRBS3O75525 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
KHDRBS3O75525 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.25■■□□□ 1.47
KHDRBS3O75525 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
KHDRBS3O75525 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
KHDRBS3O75525 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
KHDRBS3O75525 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KHDRBS3O75525 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.19■■□□□ 1.46
KHDRBS3O75525 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
KHDRBS3O75525 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
KHDRBS3O75525 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
KHDRBS3O75525 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
KHDRBS3O75525 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KHDRBS3O75525 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.18■■□□□ 1.46
KHDRBS3O75525 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KHDRBS3O75525 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
KHDRBS3O75525 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KHDRBS3O75525 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KHDRBS3O75525 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.16■■□□□ 1.46
KHDRBS3O75525 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.16■■□□□ 1.46
KHDRBS3O75525 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.16■■□□□ 1.46
KHDRBS3O75525 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
KHDRBS3O75525 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.15■■□□□ 1.46
KHDRBS3O75525 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
KHDRBS3O75525 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
KHDRBS3O75525 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.12■■□□□ 1.45
KHDRBS3O75525 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KHDRBS3O75525 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KHDRBS3O75525 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KHDRBS3O75525 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.1■■□□□ 1.45
KHDRBS3O75525 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
KHDRBS3O75525 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
KHDRBS3O75525 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
KHDRBS3O75525 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
KHDRBS3O75525 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
KHDRBS3O75525 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
KHDRBS3O75525 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.04■■□□□ 1.44
KHDRBS3O75525 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.03■■□□□ 1.44
KHDRBS3O75525 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KHDRBS3O75525 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
KHDRBS3O75525 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.02■■□□□ 1.44
KHDRBS3O75525 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KHDRBS3O75525 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KHDRBS3O75525 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24■■□□□ 1.43
KHDRBS3O75525 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
KHDRBS3O75525 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.99■■□□□ 1.43
KHDRBS3O75525 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
KHDRBS3O75525 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.98■■□□□ 1.43
KHDRBS3O75525 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
KHDRBS3O75525 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
KHDRBS3O75525 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KHDRBS3O75525 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KHDRBS3O75525 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.97■■□□□ 1.43
KHDRBS3O75525 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.97■■□□□ 1.43
KHDRBS3O75525 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KHDRBS3O75525 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KHDRBS3O75525 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KHDRBS3O75525 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KHDRBS3O75525 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
KHDRBS3O75525 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KHDRBS3O75525 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
KHDRBS3O75525 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KHDRBS3O75525 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.9■■□□□ 1.42
KHDRBS3O75525 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
KHDRBS3O75525 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KHDRBS3O75525 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.89■■□□□ 1.41
KHDRBS3O75525 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
KHDRBS3O75525 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KHDRBS3O75525 ABCB10P1-201ENST00000614297 2181 ntBASIC23.88■■□□□ 1.41
KHDRBS3O75525 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.88■■□□□ 1.41
KHDRBS3O75525 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.87■■□□□ 1.41
KHDRBS3O75525 AL161658.1-201ENST00000623641 1967 ntBASIC23.87■■□□□ 1.41
KHDRBS3O75525 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
KHDRBS3O75525 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KHDRBS3O75525 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KHDRBS3O75525 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KHDRBS3O75525 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KHDRBS3O75525 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
KHDRBS3O75525 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KHDRBS3O75525 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KHDRBS3O75525 AL133380.1-201ENST00000506013 324 ntBASIC23.83■■□□□ 1.41
KHDRBS3O75525 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.83■■□□□ 1.41
KHDRBS3O75525 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.83■■□□□ 1.4
KHDRBS3O75525 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
KHDRBS3O75525 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KHDRBS3O75525 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KHDRBS3O75525 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
KHDRBS3O75525 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
KHDRBS3O75525 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KHDRBS3O75525 WASH5P-204ENST00000632292 975 ntBASIC23.8■■□□□ 1.4
KHDRBS3O75525 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
KHDRBS3O75525 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KHDRBS3O75525 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KHDRBS3O75525 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KHDRBS3O75525 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KHDRBS3O75525 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms