Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF253O75346 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF253O75346 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF253O75346 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.88■□□□□ 0.93
ZNF253O75346 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ZNF253O75346 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF253O75346 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF253O75346 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ZNF253O75346 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
ZNF253O75346 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ZNF253O75346 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF253O75346 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZNF253O75346 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF253O75346 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF253O75346 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNF253O75346 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF253O75346 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF253O75346 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF253O75346 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF253O75346 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF253O75346 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF253O75346 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF253O75346 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF253O75346 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF253O75346 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF253O75346 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNF253O75346 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF253O75346 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF253O75346 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF253O75346 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.8■□□□□ 0.92
ZNF253O75346 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF253O75346 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ZNF253O75346 ZNRF2P1-201ENST00000441407 443 ntBASIC20.79■□□□□ 0.92
ZNF253O75346 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF253O75346 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF253O75346 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF253O75346 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF253O75346 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF253O75346 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF253O75346 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF253O75346 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF253O75346 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF253O75346 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF253O75346 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF253O75346 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF253O75346 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF253O75346 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF253O75346 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ZNF253O75346 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF253O75346 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ZNF253O75346 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.7■□□□□ 0.9
ZNF253O75346 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
ZNF253O75346 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF253O75346 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF253O75346 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF253O75346 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF253O75346 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF253O75346 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF253O75346 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF253O75346 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF253O75346 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF253O75346 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF253O75346 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF253O75346 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF253O75346 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ZNF253O75346 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF253O75346 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ZNF253O75346 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF253O75346 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF253O75346 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ZNF253O75346 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF253O75346 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF253O75346 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF253O75346 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF253O75346 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ZNF253O75346 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
ZNF253O75346 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ZNF253O75346 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF253O75346 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF253O75346 DYNLL1-208ENST00000550178 581 ntBASIC20.54■□□□□ 0.88
ZNF253O75346 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF253O75346 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF253O75346 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF253O75346 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ZNF253O75346 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF253O75346 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ZNF253O75346 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF253O75346 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF253O75346 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ZNF253O75346 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF253O75346 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF253O75346 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF253O75346 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF253O75346 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
ZNF253O75346 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF253O75346 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF253O75346 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.48■□□□□ 0.87
ZNF253O75346 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF253O75346 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF253O75346 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms