Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rdh5O55240 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.03■■□□□ 1.44
Rdh5O55240 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
Rdh5O55240 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rdh5O55240 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rdh5O55240 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rdh5O55240 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24■■□□□ 1.43
Rdh5O55240 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rdh5O55240 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rdh5O55240 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rdh5O55240 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rdh5O55240 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rdh5O55240 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rdh5O55240 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Rdh5O55240 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rdh5O55240 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rdh5O55240 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rdh5O55240 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rdh5O55240 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Rdh5O55240 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rdh5O55240 Zfp131-205ENSMUST00000223812 663 ntBASIC23.93■■□□□ 1.42
Rdh5O55240 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rdh5O55240 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rdh5O55240 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.91■■□□□ 1.42
Rdh5O55240 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.89■■□□□ 1.41
Rdh5O55240 Gm16148-201ENSMUST00000119653 893 ntBASIC23.87■■□□□ 1.41
Rdh5O55240 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Rdh5O55240 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rdh5O55240 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.86■■□□□ 1.41
Rdh5O55240 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rdh5O55240 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rdh5O55240 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Rdh5O55240 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rdh5O55240 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Rdh5O55240 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Rdh5O55240 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Rdh5O55240 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Rdh5O55240 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rdh5O55240 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Rdh5O55240 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rdh5O55240 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rdh5O55240 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rdh5O55240 Zxda-201ENSMUST00000117281 2621 ntBASIC23.8■■□□□ 1.4
Rdh5O55240 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.79■■□□□ 1.4
Rdh5O55240 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rdh5O55240 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rdh5O55240 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Rdh5O55240 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rdh5O55240 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rdh5O55240 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rdh5O55240 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Rdh5O55240 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rdh5O55240 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rdh5O55240 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rdh5O55240 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rdh5O55240 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.72■■□□□ 1.39
Rdh5O55240 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rdh5O55240 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Rdh5O55240 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rdh5O55240 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rdh5O55240 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rdh5O55240 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Rdh5O55240 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.69■■□□□ 1.38
Rdh5O55240 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.68■■□□□ 1.38
Rdh5O55240 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rdh5O55240 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Rdh5O55240 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rdh5O55240 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rdh5O55240 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.66■■□□□ 1.38
Rdh5O55240 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.66■■□□□ 1.38
Rdh5O55240 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rdh5O55240 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rdh5O55240 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.64■■□□□ 1.38
Rdh5O55240 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Rdh5O55240 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rdh5O55240 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Rdh5O55240 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
Rdh5O55240 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
Rdh5O55240 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rdh5O55240 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rdh5O55240 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rdh5O55240 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
Rdh5O55240 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rdh5O55240 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rdh5O55240 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.56■■□□□ 1.36
Rdh5O55240 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rdh5O55240 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rdh5O55240 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rdh5O55240 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rdh5O55240 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rdh5O55240 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rdh5O55240 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rdh5O55240 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rdh5O55240 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rdh5O55240 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rdh5O55240 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rdh5O55240 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rdh5O55240 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Rdh5O55240 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rdh5O55240 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms