Protein–RNA interactions for Protein: O43511

SLC26A4, Pendrin, humanhuman

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC26A4O43511 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SLC26A4O43511 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SLC26A4O43511 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.39■■■□□ 2.46
SLC26A4O43511 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.37■■■□□ 2.45
SLC26A4O43511 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SLC26A4O43511 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC26A4O43511 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SLC26A4O43511 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.35■■■□□ 2.45
SLC26A4O43511 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLC26A4O43511 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLC26A4O43511 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.31■■■□□ 2.44
SLC26A4O43511 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
SLC26A4O43511 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.31■■■□□ 2.44
SLC26A4O43511 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SLC26A4O43511 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SLC26A4O43511 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
SLC26A4O43511 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SLC26A4O43511 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SLC26A4O43511 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.28■■■□□ 2.44
SLC26A4O43511 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SLC26A4O43511 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
SLC26A4O43511 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
SLC26A4O43511 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.26■■■□□ 2.44
SLC26A4O43511 AC136428.2-201ENST00000563187 214 ntBASIC30.24■■■□□ 2.43
SLC26A4O43511 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SLC26A4O43511 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.23■■■□□ 2.43
SLC26A4O43511 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.23■■■□□ 2.43
SLC26A4O43511 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.23■■■□□ 2.43
SLC26A4O43511 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.23■■■□□ 2.43
SLC26A4O43511 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SLC26A4O43511 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
SLC26A4O43511 AC097358.2-201ENST00000607541 1159 ntBASIC30.21■■■□□ 2.43
SLC26A4O43511 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
SLC26A4O43511 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SLC26A4O43511 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SLC26A4O43511 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.18■■■□□ 2.42
SLC26A4O43511 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SLC26A4O43511 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SLC26A4O43511 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.16■■■□□ 2.42
SLC26A4O43511 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SLC26A4O43511 AL391121.1-201ENST00000607967 1349 ntBASIC30.16■■■□□ 2.42
SLC26A4O43511 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SLC26A4O43511 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SLC26A4O43511 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SLC26A4O43511 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.15■■■□□ 2.42
SLC26A4O43511 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.15■■■□□ 2.42
SLC26A4O43511 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.14■■■□□ 2.42
SLC26A4O43511 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SLC26A4O43511 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SLC26A4O43511 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.12■■■□□ 2.41
SLC26A4O43511 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SLC26A4O43511 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.12■■■□□ 2.41
SLC26A4O43511 CAHM-201ENST00000604200 896 ntBASIC30.12■■■□□ 2.41
SLC26A4O43511 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SLC26A4O43511 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SLC26A4O43511 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.11■■■□□ 2.41
SLC26A4O43511 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.11■■■□□ 2.41
SLC26A4O43511 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SLC26A4O43511 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SLC26A4O43511 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
SLC26A4O43511 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.1■■■□□ 2.41
SLC26A4O43511 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.09■■■□□ 2.41
SLC26A4O43511 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SLC26A4O43511 AL161658.1-201ENST00000623641 1967 ntBASIC30.08■■■□□ 2.41
SLC26A4O43511 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SLC26A4O43511 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SLC26A4O43511 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SLC26A4O43511 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SLC26A4O43511 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.07■■■□□ 2.4
SLC26A4O43511 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.07■■■□□ 2.4
SLC26A4O43511 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SLC26A4O43511 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SLC26A4O43511 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SLC26A4O43511 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.05■■■□□ 2.4
SLC26A4O43511 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SLC26A4O43511 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SLC26A4O43511 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
SLC26A4O43511 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.04■■■□□ 2.4
SLC26A4O43511 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
SLC26A4O43511 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SLC26A4O43511 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SLC26A4O43511 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30■■■□□ 2.39
SLC26A4O43511 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30■■■□□ 2.39
SLC26A4O43511 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30■■■□□ 2.39
SLC26A4O43511 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
SLC26A4O43511 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.99■■■□□ 2.39
SLC26A4O43511 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SLC26A4O43511 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SLC26A4O43511 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.98■■■□□ 2.39
SLC26A4O43511 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.97■■■□□ 2.39
SLC26A4O43511 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
SLC26A4O43511 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SLC26A4O43511 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SLC26A4O43511 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
SLC26A4O43511 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.95■■■□□ 2.38
SLC26A4O43511 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SLC26A4O43511 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.93■■■□□ 2.38
SLC26A4O43511 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SLC26A4O43511 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
SLC26A4O43511 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms