Protein–RNA interactions for Protein: O35253

Smad7, Mothers against decapentaplegic homolog 7, mousemouse

Predictions only

Length 426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad7O35253 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smad7O35253 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Smad7O35253 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.46■■□□□ 1.03
Smad7O35253 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smad7O35253 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smad7O35253 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smad7O35253 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smad7O35253 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smad7O35253 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smad7O35253 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Smad7O35253 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smad7O35253 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.35■■□□□ 1.01
Smad7O35253 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smad7O35253 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smad7O35253 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smad7O35253 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smad7O35253 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.31■■□□□ 1
Smad7O35253 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smad7O35253 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smad7O35253 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smad7O35253 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Smad7O35253 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Smad7O35253 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Smad7O35253 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smad7O35253 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smad7O35253 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Smad7O35253 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.26■□□□□ 0.99
Smad7O35253 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.25■□□□□ 0.99
Smad7O35253 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smad7O35253 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Smad7O35253 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smad7O35253 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.24■□□□□ 0.99
Smad7O35253 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smad7O35253 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smad7O35253 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smad7O35253 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smad7O35253 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smad7O35253 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Smad7O35253 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Smad7O35253 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.19■□□□□ 0.98
Smad7O35253 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad7O35253 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smad7O35253 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Smad7O35253 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad7O35253 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.15■□□□□ 0.98
Smad7O35253 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad7O35253 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smad7O35253 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Smad7O35253 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.12■□□□□ 0.97
Smad7O35253 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Smad7O35253 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Smad7O35253 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
Smad7O35253 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smad7O35253 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smad7O35253 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.1■□□□□ 0.97
Smad7O35253 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smad7O35253 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smad7O35253 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Smad7O35253 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smad7O35253 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.07■□□□□ 0.96
Smad7O35253 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Smad7O35253 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.07■□□□□ 0.96
Smad7O35253 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smad7O35253 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Smad7O35253 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smad7O35253 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smad7O35253 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smad7O35253 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smad7O35253 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smad7O35253 Nkain2-201ENSMUST00000092602 558 ntBASIC21.02■□□□□ 0.96
Smad7O35253 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.01■□□□□ 0.95
Smad7O35253 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Smad7O35253 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smad7O35253 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Smad7O35253 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smad7O35253 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smad7O35253 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Smad7O35253 Gm7432-201ENSMUST00000210343 879 ntBASIC20.99■□□□□ 0.95
Smad7O35253 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.98■□□□□ 0.95
Smad7O35253 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.98■□□□□ 0.95
Smad7O35253 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smad7O35253 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smad7O35253 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Smad7O35253 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.96■□□□□ 0.95
Smad7O35253 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Smad7O35253 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Smad7O35253 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smad7O35253 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smad7O35253 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smad7O35253 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smad7O35253 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smad7O35253 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smad7O35253 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smad7O35253 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smad7O35253 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smad7O35253 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smad7O35253 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.89■□□□□ 0.94
Smad7O35253 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smad7O35253 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smad7O35253 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms