Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.25■■□□□ 1.31
RFPL4AA6NLU0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFPL4AA6NLU0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFPL4AA6NLU0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFPL4AA6NLU0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
RFPL4AA6NLU0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
RFPL4AA6NLU0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.24■■□□□ 1.31
RFPL4AA6NLU0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.24■■□□□ 1.31
RFPL4AA6NLU0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.24■■□□□ 1.31
RFPL4AA6NLU0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFPL4AA6NLU0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFPL4AA6NLU0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RFPL4AA6NLU0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.23■■□□□ 1.31
RFPL4AA6NLU0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RFPL4AA6NLU0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFPL4AA6NLU0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
RFPL4AA6NLU0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFPL4AA6NLU0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.18■■□□□ 1.3
RFPL4AA6NLU0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFPL4AA6NLU0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL4AA6NLU0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL4AA6NLU0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.16■■□□□ 1.3
RFPL4AA6NLU0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFPL4AA6NLU0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFPL4AA6NLU0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RFPL4AA6NLU0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFPL4AA6NLU0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFPL4AA6NLU0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.14■■□□□ 1.29
RFPL4AA6NLU0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
RFPL4AA6NLU0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFPL4AA6NLU0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.13■■□□□ 1.29
RFPL4AA6NLU0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFPL4AA6NLU0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.12■■□□□ 1.29
RFPL4AA6NLU0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFPL4AA6NLU0 AC139426.1-201ENST00000568218 2529 ntBASIC23.12■■□□□ 1.29
RFPL4AA6NLU0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.11■■□□□ 1.29
RFPL4AA6NLU0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.1■■□□□ 1.29
RFPL4AA6NLU0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RFPL4AA6NLU0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RFPL4AA6NLU0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RFPL4AA6NLU0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RFPL4AA6NLU0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFPL4AA6NLU0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.07■■□□□ 1.28
RFPL4AA6NLU0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RFPL4AA6NLU0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.06■■□□□ 1.28
RFPL4AA6NLU0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFPL4AA6NLU0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.06■■□□□ 1.28
RFPL4AA6NLU0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.06■■□□□ 1.28
RFPL4AA6NLU0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFPL4AA6NLU0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFPL4AA6NLU0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.05■■□□□ 1.28
RFPL4AA6NLU0 AC120057.4-201ENST00000624722 1615 ntBASIC23.05■■□□□ 1.28
RFPL4AA6NLU0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.04■■□□□ 1.28
RFPL4AA6NLU0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFPL4AA6NLU0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFPL4AA6NLU0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFPL4AA6NLU0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFPL4AA6NLU0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RFPL4AA6NLU0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFPL4AA6NLU0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23■■□□□ 1.27
RFPL4AA6NLU0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFPL4AA6NLU0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RFPL4AA6NLU0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RFPL4AA6NLU0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RFPL4AA6NLU0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RFPL4AA6NLU0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.96■■□□□ 1.27
RFPL4AA6NLU0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RFPL4AA6NLU0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RFPL4AA6NLU0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RFPL4AA6NLU0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
RFPL4AA6NLU0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RFPL4AA6NLU0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RFPL4AA6NLU0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
RFPL4AA6NLU0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.92■■□□□ 1.26
RFPL4AA6NLU0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RFPL4AA6NLU0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RFPL4AA6NLU0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
RFPL4AA6NLU0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RFPL4AA6NLU0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.89■■□□□ 1.25
RFPL4AA6NLU0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFPL4AA6NLU0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.87■■□□□ 1.25
RFPL4AA6NLU0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFPL4AA6NLU0 RARRES2P7-201ENST00000567349 469 ntBASIC22.87■■□□□ 1.25
RFPL4AA6NLU0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFPL4AA6NLU0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFPL4AA6NLU0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFPL4AA6NLU0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFPL4AA6NLU0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RFPL4AA6NLU0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
RFPL4AA6NLU0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RFPL4AA6NLU0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RFPL4AA6NLU0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.83■■□□□ 1.25
RFPL4AA6NLU0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RFPL4AA6NLU0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RFPL4AA6NLU0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFPL4AA6NLU0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFPL4AA6NLU0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.81■■□□□ 1.24
RFPL4AA6NLU0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RFPL4AA6NLU0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFPL4AA6NLU0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms