Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HTR3EA5X5Y0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.88■■□□□ 1.57
HTR3EA5X5Y0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.87■■□□□ 1.57
HTR3EA5X5Y0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HTR3EA5X5Y0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HTR3EA5X5Y0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HTR3EA5X5Y0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC24.83■■□□□ 1.57
HTR3EA5X5Y0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.83■■□□□ 1.56
HTR3EA5X5Y0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HTR3EA5X5Y0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
HTR3EA5X5Y0 AL031258.1-201ENST00000623562 325 ntBASIC24.82■■□□□ 1.56
HTR3EA5X5Y0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HTR3EA5X5Y0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HTR3EA5X5Y0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.81■■□□□ 1.56
HTR3EA5X5Y0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HTR3EA5X5Y0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HTR3EA5X5Y0 AP002365.1-201ENST00000603448 772 ntBASIC24.8■■□□□ 1.56
HTR3EA5X5Y0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HTR3EA5X5Y0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
HTR3EA5X5Y0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
HTR3EA5X5Y0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HTR3EA5X5Y0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
HTR3EA5X5Y0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HTR3EA5X5Y0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
HTR3EA5X5Y0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.74■■□□□ 1.55
HTR3EA5X5Y0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.73■■□□□ 1.55
HTR3EA5X5Y0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HTR3EA5X5Y0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HTR3EA5X5Y0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
HTR3EA5X5Y0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24.73■■□□□ 1.55
HTR3EA5X5Y0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HTR3EA5X5Y0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HTR3EA5X5Y0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
HTR3EA5X5Y0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HTR3EA5X5Y0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
HTR3EA5X5Y0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.7■■□□□ 1.54
HTR3EA5X5Y0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
HTR3EA5X5Y0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HTR3EA5X5Y0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.69■■□□□ 1.54
HTR3EA5X5Y0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HTR3EA5X5Y0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
HTR3EA5X5Y0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HTR3EA5X5Y0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HTR3EA5X5Y0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HTR3EA5X5Y0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.67■■□□□ 1.54
HTR3EA5X5Y0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.67■■□□□ 1.54
HTR3EA5X5Y0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
HTR3EA5X5Y0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
HTR3EA5X5Y0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.64■■□□□ 1.54
HTR3EA5X5Y0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.64■■□□□ 1.54
HTR3EA5X5Y0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
HTR3EA5X5Y0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HTR3EA5X5Y0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HTR3EA5X5Y0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
HTR3EA5X5Y0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
HTR3EA5X5Y0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
HTR3EA5X5Y0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HTR3EA5X5Y0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
HTR3EA5X5Y0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HTR3EA5X5Y0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
HTR3EA5X5Y0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
HTR3EA5X5Y0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HTR3EA5X5Y0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HTR3EA5X5Y0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.55■■□□□ 1.52
HTR3EA5X5Y0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HTR3EA5X5Y0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HTR3EA5X5Y0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
HTR3EA5X5Y0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HTR3EA5X5Y0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
HTR3EA5X5Y0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.52■■□□□ 1.52
HTR3EA5X5Y0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
HTR3EA5X5Y0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.5■■□□□ 1.51
HTR3EA5X5Y0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
HTR3EA5X5Y0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
HTR3EA5X5Y0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.5■■□□□ 1.51
HTR3EA5X5Y0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HTR3EA5X5Y0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
HTR3EA5X5Y0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HTR3EA5X5Y0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
HTR3EA5X5Y0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HTR3EA5X5Y0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.46■■□□□ 1.51
HTR3EA5X5Y0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.46■■□□□ 1.51
HTR3EA5X5Y0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HTR3EA5X5Y0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HTR3EA5X5Y0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HTR3EA5X5Y0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
HTR3EA5X5Y0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
HTR3EA5X5Y0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.45■■□□□ 1.5
HTR3EA5X5Y0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
HTR3EA5X5Y0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.43■■□□□ 1.5
HTR3EA5X5Y0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
HTR3EA5X5Y0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HTR3EA5X5Y0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HTR3EA5X5Y0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HTR3EA5X5Y0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.41■■□□□ 1.5
HTR3EA5X5Y0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.41■■□□□ 1.5
HTR3EA5X5Y0 ABCB10P3-201ENST00000561950 2166 ntBASIC24.41■■□□□ 1.5
HTR3EA5X5Y0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
HTR3EA5X5Y0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.4■■□□□ 1.5
HTR3EA5X5Y0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms