Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdv2-1A0A0G2JGB9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.38■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.33■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.32■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Gm25238-201ENSMUST00000174914 89 ntBASIC18.27■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.27■□□□□ 0.52
Trdv2-1A0A0G2JGB9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.25■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.24■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.22■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trdv2-1A0A0G2JGB9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trdv2-1A0A0G2JGB9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.2■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdv2-1A0A0G2JGB9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trdv2-1A0A0G2JGB9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.17■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.15■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trdv2-1A0A0G2JGB9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdv2-1A0A0G2JGB9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trdv2-1A0A0G2JGB9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdv2-1A0A0G2JGB9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdv2-1A0A0G2JGB9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdv2-1A0A0G2JGB9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trdv2-1A0A0G2JGB9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.12■□□□□ 0.49
Trdv2-1A0A0G2JGB9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trdv2-1A0A0G2JGB9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdv2-1A0A0G2JGB9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trdv2-1A0A0G2JGB9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdv2-1A0A0G2JGB9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trdv2-1A0A0G2JGB9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trdv2-1A0A0G2JGB9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trdv2-1A0A0G2JGB9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trdv2-1A0A0G2JGB9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.01■□□□□ 0.47
Trdv2-1A0A0G2JGB9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18■□□□□ 0.47
Trdv2-1A0A0G2JGB9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms