Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav23A0A0G2JG17 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.44■□□□□ 0.86
Trav23A0A0G2JG17 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trav23A0A0G2JG17 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Trav23A0A0G2JG17 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.43■□□□□ 0.86
Trav23A0A0G2JG17 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav23A0A0G2JG17 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Trav23A0A0G2JG17 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trav23A0A0G2JG17 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav23A0A0G2JG17 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav23A0A0G2JG17 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav23A0A0G2JG17 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Trav23A0A0G2JG17 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.4■□□□□ 0.86
Trav23A0A0G2JG17 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav23A0A0G2JG17 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav23A0A0G2JG17 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav23A0A0G2JG17 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav23A0A0G2JG17 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav23A0A0G2JG17 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trav23A0A0G2JG17 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav23A0A0G2JG17 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
Trav23A0A0G2JG17 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav23A0A0G2JG17 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav23A0A0G2JG17 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav23A0A0G2JG17 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav23A0A0G2JG17 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trav23A0A0G2JG17 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav23A0A0G2JG17 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav23A0A0G2JG17 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav23A0A0G2JG17 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.33■□□□□ 0.85
Trav23A0A0G2JG17 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.33■□□□□ 0.84
Trav23A0A0G2JG17 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav23A0A0G2JG17 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trav23A0A0G2JG17 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav23A0A0G2JG17 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav23A0A0G2JG17 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav23A0A0G2JG17 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav23A0A0G2JG17 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav23A0A0G2JG17 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trav23A0A0G2JG17 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trav23A0A0G2JG17 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav23A0A0G2JG17 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.27■□□□□ 0.84
Trav23A0A0G2JG17 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav23A0A0G2JG17 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav23A0A0G2JG17 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trav23A0A0G2JG17 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav23A0A0G2JG17 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav23A0A0G2JG17 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav23A0A0G2JG17 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav23A0A0G2JG17 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav23A0A0G2JG17 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trav23A0A0G2JG17 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav23A0A0G2JG17 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav23A0A0G2JG17 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trav23A0A0G2JG17 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trav23A0A0G2JG17 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav23A0A0G2JG17 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav23A0A0G2JG17 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav23A0A0G2JG17 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav23A0A0G2JG17 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav23A0A0G2JG17 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav23A0A0G2JG17 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav23A0A0G2JG17 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav23A0A0G2JG17 Gm45855-201ENSMUST00000212546 880 ntBASIC20.16■□□□□ 0.82
Trav23A0A0G2JG17 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav23A0A0G2JG17 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav23A0A0G2JG17 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav23A0A0G2JG17 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trav23A0A0G2JG17 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav23A0A0G2JG17 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav23A0A0G2JG17 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.11■□□□□ 0.81
Trav23A0A0G2JG17 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav23A0A0G2JG17 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.1■□□□□ 0.81
Trav23A0A0G2JG17 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav23A0A0G2JG17 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Trav23A0A0G2JG17 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Trav23A0A0G2JG17 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav23A0A0G2JG17 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.08■□□□□ 0.81
Trav23A0A0G2JG17 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.08■□□□□ 0.81
Trav23A0A0G2JG17 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav23A0A0G2JG17 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Trav23A0A0G2JG17 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav23A0A0G2JG17 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav23A0A0G2JG17 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav23A0A0G2JG17 Gm9397-201ENSMUST00000200125 605 ntBASIC20.07■□□□□ 0.8
Trav23A0A0G2JG17 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.07■□□□□ 0.8
Trav23A0A0G2JG17 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav23A0A0G2JG17 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Trav23A0A0G2JG17 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Trav23A0A0G2JG17 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trav23A0A0G2JG17 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav23A0A0G2JG17 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav23A0A0G2JG17 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav23A0A0G2JG17 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav23A0A0G2JG17 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.03■□□□□ 0.8
Trav23A0A0G2JG17 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav23A0A0G2JG17 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav23A0A0G2JG17 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav23A0A0G2JG17 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav23A0A0G2JG17 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms