Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv30A0A0B4J1P1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv30A0A0B4J1P1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv30A0A0B4J1P1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Trbv30A0A0B4J1P1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv30A0A0B4J1P1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv30A0A0B4J1P1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trbv30A0A0B4J1P1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trbv30A0A0B4J1P1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv30A0A0B4J1P1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv30A0A0B4J1P1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv30A0A0B4J1P1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trbv30A0A0B4J1P1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Trbv30A0A0B4J1P1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv30A0A0B4J1P1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv30A0A0B4J1P1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trbv30A0A0B4J1P1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv30A0A0B4J1P1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv30A0A0B4J1P1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv30A0A0B4J1P1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv30A0A0B4J1P1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Trbv30A0A0B4J1P1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv30A0A0B4J1P1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv30A0A0B4J1P1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trbv30A0A0B4J1P1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.92■□□□□ 0.62
Trbv30A0A0B4J1P1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trbv30A0A0B4J1P1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.91■□□□□ 0.62
Trbv30A0A0B4J1P1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv30A0A0B4J1P1 Zfp131-205ENSMUST00000223812 663 ntBASIC18.9■□□□□ 0.62
Trbv30A0A0B4J1P1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trbv30A0A0B4J1P1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv30A0A0B4J1P1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv30A0A0B4J1P1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv30A0A0B4J1P1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv30A0A0B4J1P1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv30A0A0B4J1P1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv30A0A0B4J1P1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv30A0A0B4J1P1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv30A0A0B4J1P1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.84■□□□□ 0.61
Trbv30A0A0B4J1P1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv30A0A0B4J1P1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trbv30A0A0B4J1P1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv30A0A0B4J1P1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv30A0A0B4J1P1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trbv30A0A0B4J1P1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv30A0A0B4J1P1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.82■□□□□ 0.6
Trbv30A0A0B4J1P1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trbv30A0A0B4J1P1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv30A0A0B4J1P1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv30A0A0B4J1P1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trbv30A0A0B4J1P1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv30A0A0B4J1P1 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.8■□□□□ 0.6
Trbv30A0A0B4J1P1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv30A0A0B4J1P1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.8■□□□□ 0.6
Trbv30A0A0B4J1P1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv30A0A0B4J1P1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv30A0A0B4J1P1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.78■□□□□ 0.6
Trbv30A0A0B4J1P1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv30A0A0B4J1P1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.77■□□□□ 0.6
Trbv30A0A0B4J1P1 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.77■□□□□ 0.6
Trbv30A0A0B4J1P1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
Trbv30A0A0B4J1P1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv30A0A0B4J1P1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv30A0A0B4J1P1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv30A0A0B4J1P1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv30A0A0B4J1P1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Trbv30A0A0B4J1P1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trbv30A0A0B4J1P1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.73■□□□□ 0.59
Trbv30A0A0B4J1P1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv30A0A0B4J1P1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv30A0A0B4J1P1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv30A0A0B4J1P1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv30A0A0B4J1P1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv30A0A0B4J1P1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv30A0A0B4J1P1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv30A0A0B4J1P1 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.69■□□□□ 0.58
Trbv30A0A0B4J1P1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv30A0A0B4J1P1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv30A0A0B4J1P1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trbv30A0A0B4J1P1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv30A0A0B4J1P1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv30A0A0B4J1P1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv30A0A0B4J1P1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv30A0A0B4J1P1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv30A0A0B4J1P1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv30A0A0B4J1P1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.65■□□□□ 0.58
Trbv30A0A0B4J1P1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv30A0A0B4J1P1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv30A0A0B4J1P1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv30A0A0B4J1P1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv30A0A0B4J1P1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv30A0A0B4J1P1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv30A0A0B4J1P1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv30A0A0B4J1P1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv30A0A0B4J1P1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv30A0A0B4J1P1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.62■□□□□ 0.57
Trbv30A0A0B4J1P1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trbv30A0A0B4J1P1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv30A0A0B4J1P1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv30A0A0B4J1P1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms