Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Gm45855-201ENSMUST00000212546 880 ntBASIC20.6■□□□□ 0.89
Ighv1-20A0A0A6YX66 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv1-20A0A0A6YX66 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv1-20A0A0A6YX66 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ighv1-20A0A0A6YX66 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv1-20A0A0A6YX66 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv1-20A0A0A6YX66 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ighv1-20A0A0A6YX66 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv1-20A0A0A6YX66 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-20A0A0A6YX66 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ighv1-20A0A0A6YX66 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ighv1-20A0A0A6YX66 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv1-20A0A0A6YX66 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.55■□□□□ 0.88
Ighv1-20A0A0A6YX66 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv1-20A0A0A6YX66 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-20A0A0A6YX66 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-20A0A0A6YX66 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-20A0A0A6YX66 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-20A0A0A6YX66 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Ighv1-20A0A0A6YX66 Gm9397-201ENSMUST00000200125 605 ntBASIC20.53■□□□□ 0.88
Ighv1-20A0A0A6YX66 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.52■□□□□ 0.88
Ighv1-20A0A0A6YX66 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.52■□□□□ 0.88
Ighv1-20A0A0A6YX66 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.52■□□□□ 0.87
Ighv1-20A0A0A6YX66 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ighv1-20A0A0A6YX66 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv1-20A0A0A6YX66 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv1-20A0A0A6YX66 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.49■□□□□ 0.87
Ighv1-20A0A0A6YX66 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.49■□□□□ 0.87
Ighv1-20A0A0A6YX66 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-20A0A0A6YX66 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-20A0A0A6YX66 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv1-20A0A0A6YX66 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.47■□□□□ 0.87
Ighv1-20A0A0A6YX66 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv1-20A0A0A6YX66 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ighv1-20A0A0A6YX66 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ighv1-20A0A0A6YX66 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv1-20A0A0A6YX66 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv1-20A0A0A6YX66 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-20A0A0A6YX66 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-20A0A0A6YX66 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-20A0A0A6YX66 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ighv1-20A0A0A6YX66 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.42■□□□□ 0.86
Ighv1-20A0A0A6YX66 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.41■□□□□ 0.86
Ighv1-20A0A0A6YX66 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv1-20A0A0A6YX66 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ighv1-20A0A0A6YX66 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ighv1-20A0A0A6YX66 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ighv1-20A0A0A6YX66 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ighv1-20A0A0A6YX66 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ighv1-20A0A0A6YX66 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ighv1-20A0A0A6YX66 Gm24970-201ENSMUST00000175582 82 ntBASIC20.37■□□□□ 0.85
Ighv1-20A0A0A6YX66 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.37■□□□□ 0.85
Ighv1-20A0A0A6YX66 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv1-20A0A0A6YX66 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv1-20A0A0A6YX66 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Ighv1-20A0A0A6YX66 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.36■□□□□ 0.85
Ighv1-20A0A0A6YX66 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Ighv1-20A0A0A6YX66 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-20A0A0A6YX66 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Ighv1-20A0A0A6YX66 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-20A0A0A6YX66 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.33■□□□□ 0.85
Ighv1-20A0A0A6YX66 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ighv1-20A0A0A6YX66 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.32■□□□□ 0.84
Ighv1-20A0A0A6YX66 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-20A0A0A6YX66 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-20A0A0A6YX66 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-20A0A0A6YX66 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-20A0A0A6YX66 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-20A0A0A6YX66 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-20A0A0A6YX66 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.31■□□□□ 0.84
Ighv1-20A0A0A6YX66 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-20A0A0A6YX66 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-20A0A0A6YX66 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ighv1-20A0A0A6YX66 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-20A0A0A6YX66 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-20A0A0A6YX66 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ighv1-20A0A0A6YX66 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.27■□□□□ 0.84
Ighv1-20A0A0A6YX66 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-20A0A0A6YX66 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Ighv1-20A0A0A6YX66 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv1-20A0A0A6YX66 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv1-20A0A0A6YX66 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ighv1-20A0A0A6YX66 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ighv1-20A0A0A6YX66 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv1-20A0A0A6YX66 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ighv1-20A0A0A6YX66 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv1-20A0A0A6YX66 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ighv1-20A0A0A6YX66 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.2■□□□□ 0.82
Ighv1-20A0A0A6YX66 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.2■□□□□ 0.82
Ighv1-20A0A0A6YX66 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-20A0A0A6YX66 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-20A0A0A6YX66 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-20A0A0A6YX66 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-20A0A0A6YX66 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv1-20A0A0A6YX66 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.18■□□□□ 0.82
Ighv1-20A0A0A6YX66 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.18■□□□□ 0.82
Ighv1-20A0A0A6YX66 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ighv1-20A0A0A6YX66 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ighv1-20A0A0A6YX66 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Ighv1-20A0A0A6YX66 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms