Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV7A0A075B6U4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV7A0A075B6U4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV7A0A075B6U4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV7A0A075B6U4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV7A0A075B6U4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV7A0A075B6U4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
TRAV7A0A075B6U4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRAV7A0A075B6U4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV7A0A075B6U4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV7A0A075B6U4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV7A0A075B6U4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV7A0A075B6U4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV7A0A075B6U4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV7A0A075B6U4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV7A0A075B6U4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.31■□□□□ 0.2
TRAV7A0A075B6U4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV7A0A075B6U4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV7A0A075B6U4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV7A0A075B6U4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV7A0A075B6U4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV7A0A075B6U4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV7A0A075B6U4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV7A0A075B6U4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV7A0A075B6U4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
TRAV7A0A075B6U4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV7A0A075B6U4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV7A0A075B6U4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV7A0A075B6U4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV7A0A075B6U4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV7A0A075B6U4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV7A0A075B6U4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV7A0A075B6U4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV7A0A075B6U4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV7A0A075B6U4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV7A0A075B6U4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV7A0A075B6U4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV7A0A075B6U4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV7A0A075B6U4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV7A0A075B6U4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV7A0A075B6U4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV7A0A075B6U4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV7A0A075B6U4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV7A0A075B6U4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV7A0A075B6U4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV7A0A075B6U4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV7A0A075B6U4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV7A0A075B6U4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRAV7A0A075B6U4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV7A0A075B6U4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV7A0A075B6U4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV7A0A075B6U4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV7A0A075B6U4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV7A0A075B6U4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV7A0A075B6U4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV7A0A075B6U4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV7A0A075B6U4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV7A0A075B6U4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV7A0A075B6U4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAV7A0A075B6U4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV7A0A075B6U4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV7A0A075B6U4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV7A0A075B6U4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV7A0A075B6U4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV7A0A075B6U4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV7A0A075B6U4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV7A0A075B6U4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV7A0A075B6U4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV7A0A075B6U4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV7A0A075B6U4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV7A0A075B6U4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV7A0A075B6U4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV7A0A075B6U4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV7A0A075B6U4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV7A0A075B6U4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV7A0A075B6U4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV7A0A075B6U4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV7A0A075B6U4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV7A0A075B6U4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV7A0A075B6U4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV7A0A075B6U4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRAV7A0A075B6U4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV7A0A075B6U4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAV7A0A075B6U4 AC142086.6-201ENST00000621154 1765 ntBASIC16.11■□□□□ 0.17
TRAV7A0A075B6U4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV7A0A075B6U4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV7A0A075B6U4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV7A0A075B6U4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV7A0A075B6U4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV7A0A075B6U4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV7A0A075B6U4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRAV7A0A075B6U4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV7A0A075B6U4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
TRAV7A0A075B6U4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV7A0A075B6U4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TRAV7A0A075B6U4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV7A0A075B6U4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV7A0A075B6U4 AC145285.7-201ENST00000614819 1539 ntBASIC16.06■□□□□ 0.16
TRAV7A0A075B6U4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV7A0A075B6U4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms