Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.13■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.13■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.08■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Gm27322-201ENSMUST00000184007 104 ntBASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.02■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.98■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.96■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.9■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms