Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.6■□□□□ 0.57
Trav6n-6A0A075B6B2 Amer2-203ENSMUST00000225247 2662 ntBASIC18.6■□□□□ 0.57
Trav6n-6A0A075B6B2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6n-6A0A075B6B2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6n-6A0A075B6B2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6n-6A0A075B6B2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6n-6A0A075B6B2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav6n-6A0A075B6B2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trav6n-6A0A075B6B2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6n-6A0A075B6B2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.56■□□□□ 0.56
Trav6n-6A0A075B6B2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6n-6A0A075B6B2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6n-6A0A075B6B2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6n-6A0A075B6B2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6n-6A0A075B6B2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6n-6A0A075B6B2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6n-6A0A075B6B2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6n-6A0A075B6B2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6n-6A0A075B6B2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trav6n-6A0A075B6B2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trav6n-6A0A075B6B2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6n-6A0A075B6B2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6n-6A0A075B6B2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6n-6A0A075B6B2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6n-6A0A075B6B2 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.49■□□□□ 0.55
Trav6n-6A0A075B6B2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6n-6A0A075B6B2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6n-6A0A075B6B2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.47■□□□□ 0.55
Trav6n-6A0A075B6B2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6n-6A0A075B6B2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6n-6A0A075B6B2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6n-6A0A075B6B2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6n-6A0A075B6B2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trav6n-6A0A075B6B2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6n-6A0A075B6B2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Trav6n-6A0A075B6B2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6n-6A0A075B6B2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6n-6A0A075B6B2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Trav6n-6A0A075B6B2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6n-6A0A075B6B2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6n-6A0A075B6B2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6n-6A0A075B6B2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.43■□□□□ 0.54
Trav6n-6A0A075B6B2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav6n-6A0A075B6B2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6n-6A0A075B6B2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trav6n-6A0A075B6B2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6n-6A0A075B6B2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6n-6A0A075B6B2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trav6n-6A0A075B6B2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6n-6A0A075B6B2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6n-6A0A075B6B2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6n-6A0A075B6B2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trav6n-6A0A075B6B2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6n-6A0A075B6B2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6n-6A0A075B6B2 Mipep-204ENSMUST00000225043 1548 ntBASIC18.37■□□□□ 0.53
Trav6n-6A0A075B6B2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6n-6A0A075B6B2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6n-6A0A075B6B2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6n-6A0A075B6B2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6n-6A0A075B6B2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6n-6A0A075B6B2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.33■□□□□ 0.52
Trav6n-6A0A075B6B2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trav6n-6A0A075B6B2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6n-6A0A075B6B2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6n-6A0A075B6B2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6n-6A0A075B6B2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6n-6A0A075B6B2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6n-6A0A075B6B2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6n-6A0A075B6B2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6n-6A0A075B6B2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trav6n-6A0A075B6B2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trav6n-6A0A075B6B2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6n-6A0A075B6B2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav6n-6A0A075B6B2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6n-6A0A075B6B2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6n-6A0A075B6B2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trav6n-6A0A075B6B2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6n-6A0A075B6B2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6n-6A0A075B6B2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6n-6A0A075B6B2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6n-6A0A075B6B2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6n-6A0A075B6B2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.23■□□□□ 0.51
Trav6n-6A0A075B6B2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.21■□□□□ 0.51
Trav6n-6A0A075B6B2 Gm24804-201ENSMUST00000174982 85 ntBASIC18.21■□□□□ 0.51
Trav6n-6A0A075B6B2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trav6n-6A0A075B6B2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav6n-6A0A075B6B2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6n-6A0A075B6B2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6n-6A0A075B6B2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trav6n-6A0A075B6B2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6n-6A0A075B6B2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6n-6A0A075B6B2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6n-6A0A075B6B2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6n-6A0A075B6B2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6n-6A0A075B6B2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6n-6A0A075B6B2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav6n-6A0A075B6B2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6n-6A0A075B6B2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6n-6A0A075B6B2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6n-6A0A075B6B2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms