Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA3Q9Y5H0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA3Q9Y5H0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA3Q9Y5H0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA3Q9Y5H0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA3Q9Y5H0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGA3Q9Y5H0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA3Q9Y5H0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA3Q9Y5H0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHGA3Q9Y5H0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGA3Q9Y5H0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PCDHGA3Q9Y5H0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDHGA3Q9Y5H0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGA3Q9Y5H0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGA3Q9Y5H0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA3Q9Y5H0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA3Q9Y5H0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA3Q9Y5H0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGA3Q9Y5H0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA3Q9Y5H0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA3Q9Y5H0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA3Q9Y5H0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA3Q9Y5H0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA3Q9Y5H0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA3Q9Y5H0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDHGA3Q9Y5H0 AC068587.7-201ENST00000641602 218 ntBASIC20.96■□□□□ 0.95
PCDHGA3Q9Y5H0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA3Q9Y5H0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA3Q9Y5H0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA3Q9Y5H0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 ID1-201ENST00000376105 1233 ntBASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGA3Q9Y5H0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 TPRG1LP1-201ENST00000598702 760 ntBASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PCDHGA3Q9Y5H0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PCDHGA3Q9Y5H0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA3Q9Y5H0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHGA3Q9Y5H0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA3Q9Y5H0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA3Q9Y5H0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PCDHGA3Q9Y5H0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms