Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE7Q9UBL6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE7Q9UBL6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CPNE7Q9UBL6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE7Q9UBL6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE7Q9UBL6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE7Q9UBL6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE7Q9UBL6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE7Q9UBL6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.03■□□□□ 0.96
CPNE7Q9UBL6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE7Q9UBL6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE7Q9UBL6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE7Q9UBL6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 IKBKGP1-201ENST00000612193 1073 ntBASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 AC009237.3-201ENST00000393279 1427 ntBASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
CPNE7Q9UBL6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CPNE7Q9UBL6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 AC087742.1-201ENST00000575880 1738 ntBASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE7Q9UBL6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE7Q9UBL6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE7Q9UBL6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CPNE7Q9UBL6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE7Q9UBL6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE7Q9UBL6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE7Q9UBL6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21■□□□□ 0.95
CPNE7Q9UBL6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE7Q9UBL6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPNE7Q9UBL6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE7Q9UBL6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CPNE7Q9UBL6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE7Q9UBL6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CPNE7Q9UBL6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPNE7Q9UBL6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE7Q9UBL6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE7Q9UBL6 AC005224.4-201ENST00000583262 1652 ntBASIC20.99■□□□□ 0.95
CPNE7Q9UBL6 OR7E47P-201ENST00000546390 1422 ntBASIC20.99■□□□□ 0.95
CPNE7Q9UBL6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.99■□□□□ 0.95
CPNE7Q9UBL6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.99■□□□□ 0.95
CPNE7Q9UBL6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.99■□□□□ 0.95
CPNE7Q9UBL6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms