Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Gm7290-201ENSMUST00000104990 617 ntBASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Gm12918-201ENSMUST00000120234 636 ntBASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Gm15710-201ENSMUST00000121821 636 ntBASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Gm5075-201ENSMUST00000196916 622 ntBASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.06■□□□□ 0.48
Rnf138Q9CQE0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf138Q9CQE0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf138Q9CQE0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.04■□□□□ 0.48
Rnf138Q9CQE0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf138Q9CQE0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf138Q9CQE0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf138Q9CQE0 Gm13148-201ENSMUST00000118892 745 ntBASIC18.04■□□□□ 0.48
Rnf138Q9CQE0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf138Q9CQE0 Gm10602-201ENSMUST00000098239 609 ntBASIC18.04■□□□□ 0.48
Rnf138Q9CQE0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Rnf138Q9CQE0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf138Q9CQE0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Mir5133-201ENSMUST00000174955 77 ntBASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf138Q9CQE0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf138Q9CQE0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf138Q9CQE0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf138Q9CQE0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf138Q9CQE0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Rnf138Q9CQE0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.02■□□□□ 0.48
Rnf138Q9CQE0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf138Q9CQE0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.02■□□□□ 0.48
Rnf138Q9CQE0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf138Q9CQE0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Rnf138Q9CQE0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Gm6365-201ENSMUST00000054711 744 ntBASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf138Q9CQE0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf138Q9CQE0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf138Q9CQE0 Gm5540-201ENSMUST00000131852 1848 ntBASIC18■□□□□ 0.47
Rnf138Q9CQE0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rnf138Q9CQE0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf138Q9CQE0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf138Q9CQE0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf138Q9CQE0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rnf138Q9CQE0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf138Q9CQE0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18■□□□□ 0.47
Rnf138Q9CQE0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18■□□□□ 0.47
Rnf138Q9CQE0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18■□□□□ 0.47
Rnf138Q9CQE0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 156.7 ms