Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC44A1Q8WWI5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC44A1Q8WWI5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC44A1Q8WWI5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC44A1Q8WWI5 MIR4787-201ENST00000607364 84 ntBASIC21.73■■□□□ 1.07
SLC44A1Q8WWI5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.73■■□□□ 1.07
SLC44A1Q8WWI5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC44A1Q8WWI5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC44A1Q8WWI5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
SLC44A1Q8WWI5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SLC44A1Q8WWI5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC44A1Q8WWI5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC44A1Q8WWI5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC44A1Q8WWI5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
SLC44A1Q8WWI5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC44A1Q8WWI5 AC010997.5-201ENST00000609182 354 ntBASIC21.72■■□□□ 1.07
SLC44A1Q8WWI5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC44A1Q8WWI5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC44A1Q8WWI5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 AL031602.1-201ENST00000633169 911 ntBASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC44A1Q8WWI5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 RARRES2P1-201ENST00000474487 481 ntBASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC44A1Q8WWI5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC44A1Q8WWI5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 FEM1AP4-201ENST00000443167 1987 ntBASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC44A1Q8WWI5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC44A1Q8WWI5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC44A1Q8WWI5 AC079089.2-201ENST00000531211 1277 ntBASIC21.67■■□□□ 1.06
SLC44A1Q8WWI5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC44A1Q8WWI5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC44A1Q8WWI5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SLC44A1Q8WWI5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms