Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim60Q8VI40 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Trim60Q8VI40 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.83■□□□□ 0.76
Trim60Q8VI40 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim60Q8VI40 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.82■□□□□ 0.76
Trim60Q8VI40 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim60Q8VI40 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim60Q8VI40 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim60Q8VI40 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim60Q8VI40 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trim60Q8VI40 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim60Q8VI40 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim60Q8VI40 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim60Q8VI40 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Trim60Q8VI40 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trim60Q8VI40 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim60Q8VI40 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Serp2-204ENSMUST00000228055 705 ntBASIC19.8■□□□□ 0.76
Trim60Q8VI40 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim60Q8VI40 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.79■□□□□ 0.76
Trim60Q8VI40 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Golph3-205ENSMUST00000228671 2842 ntBASIC19.79■□□□□ 0.76
Trim60Q8VI40 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim60Q8VI40 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim60Q8VI40 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.78■□□□□ 0.76
Trim60Q8VI40 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Trim60Q8VI40 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim60Q8VI40 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim60Q8VI40 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim60Q8VI40 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim60Q8VI40 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim60Q8VI40 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim60Q8VI40 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim60Q8VI40 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.77■□□□□ 0.76
Trim60Q8VI40 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.77■□□□□ 0.76
Trim60Q8VI40 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim60Q8VI40 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim60Q8VI40 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim60Q8VI40 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms