Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.65■□□□□ 0.58
Q8VDP2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.65■□□□□ 0.58
Q8VDP2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Gm9812-201ENSMUST00000061934 968 ntBASIC18.65■□□□□ 0.58
Q8VDP2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.65■□□□□ 0.58
Q8VDP2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.65■□□□□ 0.58
Q8VDP2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Q8VDP2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.65■□□□□ 0.58
Q8VDP2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8VDP2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Q8VDP2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Q8VDP2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.64■□□□□ 0.58
Q8VDP2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q8VDP2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q8VDP2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Q8VDP2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.64■□□□□ 0.57
Q8VDP2 BC021767-201ENSMUST00000126387 1716 ntBASIC18.64■□□□□ 0.57
Q8VDP2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q8VDP2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q8VDP2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q8VDP2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q8VDP2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q8VDP2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Q8VDP2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q8VDP2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q8VDP2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Q8VDP2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q8VDP2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Q8VDP2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q8VDP2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q8VDP2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q8VDP2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q8VDP2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Q8VDP2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Q8VDP2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.63■□□□□ 0.57
Q8VDP2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q8VDP2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q8VDP2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.63■□□□□ 0.57
Q8VDP2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q8VDP2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Q8VDP2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q8VDP2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q8VDP2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q8VDP2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q8VDP2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q8VDP2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q8VDP2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q8VDP2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Q8VDP2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q8VDP2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.62■□□□□ 0.57
Q8VDP2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q8VDP2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q8VDP2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.62■□□□□ 0.57
Q8VDP2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Q8VDP2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Q8VDP2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q8VDP2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.61■□□□□ 0.57
Q8VDP2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.61■□□□□ 0.57
Q8VDP2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Q8VDP2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q8VDP2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q8VDP2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q8VDP2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Q8VDP2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Q8VDP2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q8VDP2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q8VDP2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q8VDP2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q8VDP2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q8VDP2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q8VDP2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.6■□□□□ 0.57
Q8VDP2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q8VDP2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q8VDP2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q8VDP2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Q8VDP2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Q8VDP2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q8VDP2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Q8VDP2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q8VDP2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.6■□□□□ 0.57
Q8VDP2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Q8VDP2 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.59■□□□□ 0.57
Q8VDP2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Q8VDP2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q8VDP2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms