Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC092053.2-201ENST00000640557 1818 ntBASIC20.9■□□□□ 0.94
KRT78Q8N1N4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 AC233992.3-201ENST00000607491 485 ntBASIC20.9■□□□□ 0.94
KRT78Q8N1N4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT78Q8N1N4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.89■□□□□ 0.94
KRT78Q8N1N4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KRT78Q8N1N4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT78Q8N1N4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.89■□□□□ 0.93
KRT78Q8N1N4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT78Q8N1N4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.89■□□□□ 0.93
KRT78Q8N1N4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.89■□□□□ 0.93
KRT78Q8N1N4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT78Q8N1N4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT78Q8N1N4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT78Q8N1N4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT78Q8N1N4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT78Q8N1N4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT78Q8N1N4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT78Q8N1N4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.88■□□□□ 0.93
KRT78Q8N1N4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.88■□□□□ 0.93
KRT78Q8N1N4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT78Q8N1N4 AC110285.6-201ENST00000617652 491 ntBASIC20.88■□□□□ 0.93
KRT78Q8N1N4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT78Q8N1N4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT78Q8N1N4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT78Q8N1N4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.88■□□□□ 0.93
KRT78Q8N1N4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
KRT78Q8N1N4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT78Q8N1N4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT78Q8N1N4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.88■□□□□ 0.93
KRT78Q8N1N4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 EDA-201ENST00000338901 1233 ntBASIC20.87■□□□□ 0.93
KRT78Q8N1N4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT78Q8N1N4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 AC126544.1-201ENST00000580842 1059 ntBASIC20.86■□□□□ 0.93
KRT78Q8N1N4 OXCT2P1-201ENST00000447263 1535 ntBASIC20.86■□□□□ 0.93
KRT78Q8N1N4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 EP400NL-214ENST00000641289 2402 ntBASIC20.86■□□□□ 0.93
KRT78Q8N1N4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
KRT78Q8N1N4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT78Q8N1N4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT78Q8N1N4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
KRT78Q8N1N4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT78Q8N1N4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT78Q8N1N4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT78Q8N1N4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.85■□□□□ 0.93
KRT78Q8N1N4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
KRT78Q8N1N4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT78Q8N1N4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
KRT78Q8N1N4 AL139246.5-201ENST00000606645 996 ntBASIC20.85■□□□□ 0.93
KRT78Q8N1N4 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.85■□□□□ 0.93
KRT78Q8N1N4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms