Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf4Q8K4J2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf4Q8K4J2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf4Q8K4J2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf4Q8K4J2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf4Q8K4J2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf4Q8K4J2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf4Q8K4J2 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.51■□□□□ 0.39
Ebf4Q8K4J2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf4Q8K4J2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf4Q8K4J2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf4Q8K4J2 Gm7143-201ENSMUST00000222811 859 ntBASIC17.5■□□□□ 0.39
Ebf4Q8K4J2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf4Q8K4J2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf4Q8K4J2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf4Q8K4J2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf4Q8K4J2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ebf4Q8K4J2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf4Q8K4J2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf4Q8K4J2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf4Q8K4J2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Ebf4Q8K4J2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf4Q8K4J2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf4Q8K4J2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.48■□□□□ 0.39
Ebf4Q8K4J2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf4Q8K4J2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.48■□□□□ 0.39
Ebf4Q8K4J2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf4Q8K4J2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Ebf4Q8K4J2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf4Q8K4J2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ebf4Q8K4J2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Ebf4Q8K4J2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.46■□□□□ 0.38
Ebf4Q8K4J2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Cap2-205ENSMUST00000225824 1634 ntBASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf4Q8K4J2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ebf4Q8K4J2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms