Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Gm12821-201ENSMUST00000120022 600 ntBASIC20.51■□□□□ 0.87
Nop53Q8BK35 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nop53Q8BK35 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nop53Q8BK35 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nop53Q8BK35 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.5■□□□□ 0.87
Nop53Q8BK35 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nop53Q8BK35 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nop53Q8BK35 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nop53Q8BK35 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nop53Q8BK35 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nop53Q8BK35 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nop53Q8BK35 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nop53Q8BK35 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Nop53Q8BK35 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nop53Q8BK35 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nop53Q8BK35 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nop53Q8BK35 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nop53Q8BK35 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Nop53Q8BK35 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nop53Q8BK35 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nop53Q8BK35 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.49■□□□□ 0.87
Nop53Q8BK35 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nop53Q8BK35 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nop53Q8BK35 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nop53Q8BK35 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nop53Q8BK35 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nop53Q8BK35 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.49■□□□□ 0.87
Nop53Q8BK35 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nop53Q8BK35 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nop53Q8BK35 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nop53Q8BK35 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nop53Q8BK35 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nop53Q8BK35 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.48■□□□□ 0.87
Nop53Q8BK35 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nop53Q8BK35 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Nop53Q8BK35 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Nop53Q8BK35 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nop53Q8BK35 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nop53Q8BK35 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nop53Q8BK35 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.47■□□□□ 0.87
Nop53Q8BK35 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nop53Q8BK35 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nop53Q8BK35 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nop53Q8BK35 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nop53Q8BK35 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.47■□□□□ 0.87
Nop53Q8BK35 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nop53Q8BK35 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Nop53Q8BK35 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nop53Q8BK35 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nop53Q8BK35 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop53Q8BK35 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop53Q8BK35 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Nop53Q8BK35 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop53Q8BK35 Gm27454-201ENSMUST00000185090 204 ntBASIC20.46■□□□□ 0.87
Nop53Q8BK35 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop53Q8BK35 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop53Q8BK35 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nop53Q8BK35 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.46■□□□□ 0.87
Nop53Q8BK35 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nop53Q8BK35 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nop53Q8BK35 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nop53Q8BK35 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nop53Q8BK35 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Nop53Q8BK35 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.45■□□□□ 0.86
Nop53Q8BK35 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nop53Q8BK35 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.45■□□□□ 0.86
Nop53Q8BK35 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Nop53Q8BK35 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nop53Q8BK35 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nop53Q8BK35 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nop53Q8BK35 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nop53Q8BK35 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nop53Q8BK35 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Nop53Q8BK35 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nop53Q8BK35 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nop53Q8BK35 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nop53Q8BK35 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nop53Q8BK35 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nop53Q8BK35 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.43■□□□□ 0.86
Nop53Q8BK35 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
Nop53Q8BK35 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.43■□□□□ 0.86
Nop53Q8BK35 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
Nop53Q8BK35 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nop53Q8BK35 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nop53Q8BK35 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nop53Q8BK35 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nop53Q8BK35 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Nop53Q8BK35 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms