Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scube3Q66PY1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Scube3Q66PY1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scube3Q66PY1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scube3Q66PY1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scube3Q66PY1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scube3Q66PY1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Scube3Q66PY1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.17■□□□□ 0.82
Scube3Q66PY1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Scube3Q66PY1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scube3Q66PY1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scube3Q66PY1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.17■□□□□ 0.82
Scube3Q66PY1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scube3Q66PY1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Scube3Q66PY1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.16■□□□□ 0.82
Scube3Q66PY1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scube3Q66PY1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube3Q66PY1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube3Q66PY1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube3Q66PY1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube3Q66PY1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube3Q66PY1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube3Q66PY1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scube3Q66PY1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scube3Q66PY1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scube3Q66PY1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scube3Q66PY1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scube3Q66PY1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.15■□□□□ 0.82
Scube3Q66PY1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scube3Q66PY1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scube3Q66PY1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Scube3Q66PY1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scube3Q66PY1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scube3Q66PY1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scube3Q66PY1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.14■□□□□ 0.81
Scube3Q66PY1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scube3Q66PY1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scube3Q66PY1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scube3Q66PY1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scube3Q66PY1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Scube3Q66PY1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scube3Q66PY1 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.13■□□□□ 0.81
Scube3Q66PY1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scube3Q66PY1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.13■□□□□ 0.81
Scube3Q66PY1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Scube3Q66PY1 Gm13234-201ENSMUST00000120010 747 ntBASIC20.13■□□□□ 0.81
Scube3Q66PY1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.13■□□□□ 0.81
Scube3Q66PY1 Gm26571-201ENSMUST00000181399 666 ntBASIC20.13■□□□□ 0.81
Scube3Q66PY1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scube3Q66PY1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Scube3Q66PY1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scube3Q66PY1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.13■□□□□ 0.81
Scube3Q66PY1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scube3Q66PY1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scube3Q66PY1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scube3Q66PY1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.12■□□□□ 0.81
Scube3Q66PY1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scube3Q66PY1 Gm38205-201ENSMUST00000192243 258 ntBASIC20.12■□□□□ 0.81
Scube3Q66PY1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
Scube3Q66PY1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scube3Q66PY1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.12■□□□□ 0.81
Scube3Q66PY1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Scube3Q66PY1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Golph3-202ENSMUST00000226517 2359 ntBASIC20.11■□□□□ 0.81
Scube3Q66PY1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Gm10033-202ENSMUST00000211874 928 ntBASIC20.11■□□□□ 0.81
Scube3Q66PY1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scube3Q66PY1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Scube3Q66PY1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.1■□□□□ 0.81
Scube3Q66PY1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.1■□□□□ 0.81
Scube3Q66PY1 Gm18671-201ENSMUST00000214826 683 ntBASIC20.1■□□□□ 0.81
Scube3Q66PY1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scube3Q66PY1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Scube3Q66PY1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms