Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clns1aQ61189 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clns1aQ61189 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clns1aQ61189 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clns1aQ61189 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clns1aQ61189 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clns1aQ61189 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clns1aQ61189 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clns1aQ61189 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clns1aQ61189 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.41■□□□□ 0.22
Clns1aQ61189 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.41■□□□□ 0.22
Clns1aQ61189 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clns1aQ61189 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Clns1aQ61189 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Clns1aQ61189 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Clns1aQ61189 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Clns1aQ61189 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clns1aQ61189 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clns1aQ61189 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.41■□□□□ 0.22
Clns1aQ61189 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clns1aQ61189 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clns1aQ61189 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clns1aQ61189 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clns1aQ61189 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clns1aQ61189 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clns1aQ61189 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clns1aQ61189 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clns1aQ61189 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.4■□□□□ 0.22
Clns1aQ61189 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clns1aQ61189 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.4■□□□□ 0.22
Clns1aQ61189 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.4■□□□□ 0.22
Clns1aQ61189 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Clns1aQ61189 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clns1aQ61189 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Clns1aQ61189 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.4■□□□□ 0.22
Clns1aQ61189 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clns1aQ61189 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clns1aQ61189 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clns1aQ61189 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clns1aQ61189 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.39■□□□□ 0.21
Clns1aQ61189 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.39■□□□□ 0.21
Clns1aQ61189 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clns1aQ61189 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clns1aQ61189 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clns1aQ61189 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clns1aQ61189 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clns1aQ61189 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clns1aQ61189 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clns1aQ61189 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Clns1aQ61189 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clns1aQ61189 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clns1aQ61189 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clns1aQ61189 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clns1aQ61189 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clns1aQ61189 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Clns1aQ61189 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clns1aQ61189 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clns1aQ61189 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clns1aQ61189 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clns1aQ61189 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Clns1aQ61189 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clns1aQ61189 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clns1aQ61189 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.38■□□□□ 0.21
Clns1aQ61189 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clns1aQ61189 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clns1aQ61189 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.38■□□□□ 0.21
Clns1aQ61189 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clns1aQ61189 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clns1aQ61189 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clns1aQ61189 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clns1aQ61189 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clns1aQ61189 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clns1aQ61189 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clns1aQ61189 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Clns1aQ61189 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clns1aQ61189 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clns1aQ61189 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clns1aQ61189 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clns1aQ61189 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.37■□□□□ 0.21
Clns1aQ61189 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Clns1aQ61189 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clns1aQ61189 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clns1aQ61189 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clns1aQ61189 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clns1aQ61189 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clns1aQ61189 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clns1aQ61189 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clns1aQ61189 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.36■□□□□ 0.21
Clns1aQ61189 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clns1aQ61189 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clns1aQ61189 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clns1aQ61189 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Clns1aQ61189 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clns1aQ61189 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clns1aQ61189 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clns1aQ61189 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clns1aQ61189 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clns1aQ61189 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clns1aQ61189 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Clns1aQ61189 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms