Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shroom1Q5SX79 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shroom1Q5SX79 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom1Q5SX79 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom1Q5SX79 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom1Q5SX79 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.45■□□□□ 0.86
Shroom1Q5SX79 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom1Q5SX79 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom1Q5SX79 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom1Q5SX79 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Shroom1Q5SX79 Gm13146-201ENSMUST00000118508 780 ntBASIC20.44■□□□□ 0.86
Shroom1Q5SX79 Gm27011-201ENSMUST00000182352 972 ntBASIC20.44■□□□□ 0.86
Shroom1Q5SX79 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.44■□□□□ 0.86
Shroom1Q5SX79 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.44■□□□□ 0.86
Shroom1Q5SX79 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.44■□□□□ 0.86
Shroom1Q5SX79 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shroom1Q5SX79 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Shroom1Q5SX79 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shroom1Q5SX79 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shroom1Q5SX79 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shroom1Q5SX79 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom1Q5SX79 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Shroom1Q5SX79 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom1Q5SX79 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom1Q5SX79 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom1Q5SX79 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Shroom1Q5SX79 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom1Q5SX79 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom1Q5SX79 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.43■□□□□ 0.86
Shroom1Q5SX79 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.43■□□□□ 0.86
Shroom1Q5SX79 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom1Q5SX79 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.42■□□□□ 0.86
Shroom1Q5SX79 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom1Q5SX79 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom1Q5SX79 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Shroom1Q5SX79 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Shroom1Q5SX79 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom1Q5SX79 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.42■□□□□ 0.86
Shroom1Q5SX79 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom1Q5SX79 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.42■□□□□ 0.86
Shroom1Q5SX79 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom1Q5SX79 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Shroom1Q5SX79 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom1Q5SX79 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom1Q5SX79 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom1Q5SX79 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom1Q5SX79 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom1Q5SX79 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom1Q5SX79 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Shroom1Q5SX79 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom1Q5SX79 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.41■□□□□ 0.86
Shroom1Q5SX79 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Shroom1Q5SX79 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.4■□□□□ 0.86
Shroom1Q5SX79 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.4■□□□□ 0.86
Shroom1Q5SX79 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom1Q5SX79 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom1Q5SX79 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom1Q5SX79 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom1Q5SX79 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom1Q5SX79 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom1Q5SX79 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Shroom1Q5SX79 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom1Q5SX79 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom1Q5SX79 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Shroom1Q5SX79 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Shroom1Q5SX79 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom1Q5SX79 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom1Q5SX79 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.39■□□□□ 0.85
Shroom1Q5SX79 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom1Q5SX79 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom1Q5SX79 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shroom1Q5SX79 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shroom1Q5SX79 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shroom1Q5SX79 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Shroom1Q5SX79 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shroom1Q5SX79 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shroom1Q5SX79 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.38■□□□□ 0.85
Shroom1Q5SX79 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shroom1Q5SX79 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.38■□□□□ 0.85
Shroom1Q5SX79 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shroom1Q5SX79 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shroom1Q5SX79 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.37■□□□□ 0.85
Shroom1Q5SX79 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom1Q5SX79 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Shroom1Q5SX79 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom1Q5SX79 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom1Q5SX79 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms