Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trim43aQ3TL54 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43aQ3TL54 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43aQ3TL54 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trim43aQ3TL54 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim43aQ3TL54 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim43aQ3TL54 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim43aQ3TL54 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim43aQ3TL54 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim43aQ3TL54 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.33■□□□□ 0.85
Trim43aQ3TL54 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim43aQ3TL54 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Trim43aQ3TL54 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim43aQ3TL54 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.33■□□□□ 0.85
Trim43aQ3TL54 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim43aQ3TL54 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim43aQ3TL54 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim43aQ3TL54 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim43aQ3TL54 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43aQ3TL54 Gm12922-201ENSMUST00000120626 809 ntBASIC20.32■□□□□ 0.84
Trim43aQ3TL54 Gm13241-201ENSMUST00000094493 780 ntBASIC20.32■□□□□ 0.84
Trim43aQ3TL54 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43aQ3TL54 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43aQ3TL54 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trim43aQ3TL54 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43aQ3TL54 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43aQ3TL54 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim43aQ3TL54 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim43aQ3TL54 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim43aQ3TL54 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim43aQ3TL54 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trim43aQ3TL54 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim43aQ3TL54 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim43aQ3TL54 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.31■□□□□ 0.84
Trim43aQ3TL54 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
Trim43aQ3TL54 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.31■□□□□ 0.84
Trim43aQ3TL54 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim43aQ3TL54 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim43aQ3TL54 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Trim43aQ3TL54 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim43aQ3TL54 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim43aQ3TL54 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Trim43aQ3TL54 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trim43aQ3TL54 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim43aQ3TL54 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.3■□□□□ 0.84
Trim43aQ3TL54 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim43aQ3TL54 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim43aQ3TL54 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim43aQ3TL54 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43aQ3TL54 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43aQ3TL54 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43aQ3TL54 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43aQ3TL54 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43aQ3TL54 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43aQ3TL54 Gm9847-201ENSMUST00000052528 599 ntBASIC20.29■□□□□ 0.84
Trim43aQ3TL54 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43aQ3TL54 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43aQ3TL54 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43aQ3TL54 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43aQ3TL54 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim43aQ3TL54 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.29■□□□□ 0.84
Trim43aQ3TL54 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim43aQ3TL54 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim43aQ3TL54 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim43aQ3TL54 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim43aQ3TL54 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim43aQ3TL54 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.28■□□□□ 0.84
Trim43aQ3TL54 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim43aQ3TL54 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trim43aQ3TL54 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43aQ3TL54 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim43aQ3TL54 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43aQ3TL54 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trim43aQ3TL54 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43aQ3TL54 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trim43aQ3TL54 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43aQ3TL54 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim43aQ3TL54 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim43aQ3TL54 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Trim43aQ3TL54 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43aQ3TL54 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43aQ3TL54 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43aQ3TL54 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43aQ3TL54 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.26■□□□□ 0.83
Trim43aQ3TL54 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43aQ3TL54 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43aQ3TL54 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43aQ3TL54 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43aQ3TL54 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.26■□□□□ 0.83
Trim43aQ3TL54 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim43aQ3TL54 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim43aQ3TL54 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim43aQ3TL54 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43aQ3TL54 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43aQ3TL54 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43aQ3TL54 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43aQ3TL54 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43aQ3TL54 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43aQ3TL54 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim43aQ3TL54 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 174 ms