Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col10a1Q05306 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col10a1Q05306 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col10a1Q05306 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col10a1Q05306 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col10a1Q05306 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col10a1Q05306 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col10a1Q05306 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col10a1Q05306 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.68■□□□□ 0.42
Col10a1Q05306 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col10a1Q05306 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col10a1Q05306 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.68■□□□□ 0.42
Col10a1Q05306 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.68■□□□□ 0.42
Col10a1Q05306 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.68■□□□□ 0.42
Col10a1Q05306 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.68■□□□□ 0.42
Col10a1Q05306 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col10a1Q05306 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.68■□□□□ 0.42
Col10a1Q05306 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col10a1Q05306 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col10a1Q05306 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Col10a1Q05306 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col10a1Q05306 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col10a1Q05306 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col10a1Q05306 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col10a1Q05306 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col10a1Q05306 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col10a1Q05306 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col10a1Q05306 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col10a1Q05306 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
Col10a1Q05306 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col10a1Q05306 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Col10a1Q05306 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.67■□□□□ 0.42
Col10a1Q05306 Golph3-202ENSMUST00000226517 2359 ntBASIC17.67■□□□□ 0.42
Col10a1Q05306 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col10a1Q05306 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col10a1Q05306 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Col10a1Q05306 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.67■□□□□ 0.42
Col10a1Q05306 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col10a1Q05306 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col10a1Q05306 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col10a1Q05306 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col10a1Q05306 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Col10a1Q05306 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.66■□□□□ 0.42
Col10a1Q05306 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.66■□□□□ 0.42
Col10a1Q05306 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col10a1Q05306 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.66■□□□□ 0.42
Col10a1Q05306 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col10a1Q05306 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col10a1Q05306 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col10a1Q05306 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col10a1Q05306 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col10a1Q05306 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col10a1Q05306 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col10a1Q05306 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col10a1Q05306 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col10a1Q05306 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col10a1Q05306 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.65■□□□□ 0.42
Col10a1Q05306 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.65■□□□□ 0.42
Col10a1Q05306 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.65■□□□□ 0.42
Col10a1Q05306 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.65■□□□□ 0.42
Col10a1Q05306 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col10a1Q05306 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col10a1Q05306 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col10a1Q05306 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.64■□□□□ 0.41
Col10a1Q05306 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col10a1Q05306 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col10a1Q05306 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col10a1Q05306 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col10a1Q05306 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col10a1Q05306 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Col10a1Q05306 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col10a1Q05306 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col10a1Q05306 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Col10a1Q05306 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col10a1Q05306 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col10a1Q05306 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col10a1Q05306 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.63■□□□□ 0.41
Col10a1Q05306 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col10a1Q05306 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col10a1Q05306 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col10a1Q05306 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col10a1Q05306 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col10a1Q05306 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Col10a1Q05306 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.62■□□□□ 0.41
Col10a1Q05306 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col10a1Q05306 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col10a1Q05306 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.62■□□□□ 0.41
Col10a1Q05306 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col10a1Q05306 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.62■□□□□ 0.41
Col10a1Q05306 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.62■□□□□ 0.41
Col10a1Q05306 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col10a1Q05306 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col10a1Q05306 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.62■□□□□ 0.41
Col10a1Q05306 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col10a1Q05306 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col10a1Q05306 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col10a1Q05306 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col10a1Q05306 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col10a1Q05306 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.61■□□□□ 0.41
Col10a1Q05306 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms