Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.27■□□□□ 0.68
CSNK1A1P48729 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.27■□□□□ 0.68
CSNK1A1P48729 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.27■□□□□ 0.68
CSNK1A1P48729 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1A1P48729 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CSNK1A1P48729 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.27■□□□□ 0.68
CSNK1A1P48729 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1A1P48729 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.27■□□□□ 0.68
CSNK1A1P48729 AC233992.3-201ENST00000607491 485 ntBASIC19.27■□□□□ 0.68
CSNK1A1P48729 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1A1P48729 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CSNK1A1P48729 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1A1P48729 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1A1P48729 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CSNK1A1P48729 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSNK1A1P48729 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.26■□□□□ 0.67
CSNK1A1P48729 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.26■□□□□ 0.67
CSNK1A1P48729 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.26■□□□□ 0.67
CSNK1A1P48729 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.26■□□□□ 0.67
CSNK1A1P48729 AC079089.2-201ENST00000531211 1277 ntBASIC19.26■□□□□ 0.67
CSNK1A1P48729 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.26■□□□□ 0.67
CSNK1A1P48729 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.26■□□□□ 0.67
CSNK1A1P48729 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.26■□□□□ 0.67
CSNK1A1P48729 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.26■□□□□ 0.67
CSNK1A1P48729 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CSNK1A1P48729 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1A1P48729 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 AC092053.2-201ENST00000640557 1818 ntBASIC19.25■□□□□ 0.67
CSNK1A1P48729 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 EP400NL-214ENST00000641289 2402 ntBASIC19.25■□□□□ 0.67
CSNK1A1P48729 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1A1P48729 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1A1P48729 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1A1P48729 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1A1P48729 AC008764.7-201ENST00000593779 1081 ntBASIC19.25■□□□□ 0.67
CSNK1A1P48729 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1A1P48729 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CSNK1A1P48729 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1A1P48729 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1A1P48729 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1A1P48729 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1A1P48729 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CSNK1A1P48729 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CSNK1A1P48729 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1A1P48729 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CSNK1A1P48729 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1A1P48729 EDA-201ENST00000338901 1233 ntBASIC19.24■□□□□ 0.67
CSNK1A1P48729 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
CSNK1A1P48729 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1A1P48729 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.24■□□□□ 0.67
CSNK1A1P48729 AC126544.1-201ENST00000580842 1059 ntBASIC19.24■□□□□ 0.67
CSNK1A1P48729 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.24■□□□□ 0.67
CSNK1A1P48729 AL139246.5-201ENST00000606645 996 ntBASIC19.24■□□□□ 0.67
CSNK1A1P48729 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.24■□□□□ 0.67
CSNK1A1P48729 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1A1P48729 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.24■□□□□ 0.67
CSNK1A1P48729 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1A1P48729 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1A1P48729 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CSNK1A1P48729 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1A1P48729 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1A1P48729 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1A1P48729 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.23■□□□□ 0.67
CSNK1A1P48729 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1A1P48729 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.23■□□□□ 0.67
CSNK1A1P48729 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1A1P48729 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CSNK1A1P48729 AC027682.1-201ENST00000562846 899 ntBASIC19.23■□□□□ 0.67
CSNK1A1P48729 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CSNK1A1P48729 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CSNK1A1P48729 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.23■□□□□ 0.67
CSNK1A1P48729 OXCT2P1-201ENST00000447263 1535 ntBASIC19.23■□□□□ 0.67
CSNK1A1P48729 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1A1P48729 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CSNK1A1P48729 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CSNK1A1P48729 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1A1P48729 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1A1P48729 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms